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Latest 34 Papers

Control of grain dimensions via ALLENE OXIDE CYCLASE

Authors: Luo, J., Liu, L., Yang, X., Lyon, E., Griffin, J., Shoesmith, J., Wu, W., Hamilton, R., Nuter, M., Katay-Fodor, M., Tucker, M. R., Mckim, S. M.

Date: 2026-01-16 · Version: 1
DOI: 10.64898/2026.01.15.699649

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The authors used gene editing to disrupt the barley HvAOC gene, a key enzyme in jasmonate biosynthesis, and observed enhanced vegetative growth, earlier flowering, and larger, heavier grains, phenotypes that were reversed by methyl‑jasmonate treatment. Expression analyses indicated that HvAOC functions primarily in maternal tissues, where its loss expands nutrient‑transfer structures and up‑regulates sucrose‑transport genes, linking jasmonate signaling to the coordination of maternal tissue development and grain size.

Jasmonate signaling HvAOC grain size maternal tissue development Barley (Hordeum vulgare)

Targeting of the barley cell-surface receptor SRF3 by the Blumeria hordei effector AVRA13 overlaps with AVRA13 recognition by MLA and the induction of NLR-mediated cell death.

Authors: Shi, W., Bilstein-Schloemer, M., Stolze, S. C., Platre, M. P., Hofmann, M., Doehlemann, G., Nakagami, H., Saur, I. M.

Date: 2026-01-09 · Version: 1
DOI: 10.64898/2026.01.08.698370

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study used proximity-dependent protein labeling in transgenic barley to map host interactomes of five Blumeria hordei AVRA effectors, revealing that the conserved AVRA13 specifically binds the barley cell‑surface receptor SRF3, disrupts its interaction with BAK1, and modulates iron‑homeostasis‑linked immunity. AVRA13 expression alleviates iron‑induced restriction of fungal growth, indicating that SRF3 links pathogen virulence, immune detection, and iron regulation.

AVRA13 Blumeria hordei SRF3 iron homeostasis proximity-dependent labeling

Leaf variegation in a barley EMS mutant is controlled by two epistatic mutations

Authors: Pidon, H., Nagireddy, S. R., Melzer, M., Himmelbach, A., Stein, N.

Date: 2025-12-16 · Version: 1
DOI: 10.64898/2025.12.15.694392

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study characterizes a novel variegated barley mutant whose phenotype results from duplicate dominant epistasis, representing the first documented digenic control in chloroplast-deficient mutants. Whole-genome resequencing mapped the causative loci Var4 and Var5 to chromosomes 2H and 3H, identifying an NBR1-like autophagy receptor and a DNAJ-domain protein as candidate genes involved in chloroplast proteostasis. The authors propose that combined mild proteostasis defects from each mutation exceed a functional threshold, disrupting early chloroplast development while allowing later recovery.

variegation digenic control chloroplast proteostasis barley whole-genome resequencing

Network Inference Reveals Distinct Transcriptional Regulation in Barley against Drought and Fusarium Head Blight

Authors: Steidele, C. E., Kersting, J., Hoheneder, F., List, M., Hueckelhoven, R.

Date: 2025-12-09 · Version: 1
DOI: 10.64898/2025.12.09.693163

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study used Weighted Gene Correlation Network Analysis (WGCNA) and GENIE3 to construct co‑expression modules and gene regulatory networks (GRNs) in barley subjected to Fusarium head blight and drought stress. Integration of these approaches highlighted overlapping regulatory patterns, pinpointing WRKY transcription factors as central to FHB response, while bHLH and NAC family members showed stress‑specific roles. Promoter motif enrichment further validated predicted TF‑target interactions, offering candidate regulators for future functional validation.

Fusarium head blight drought stress Barley transcription factor networks co‑expression analysis

Barley C2-Domain Abscisic Acid-Related protein CARa supports susceptibility to Blumeria hordei and localizes to the extrahaustorial membrane

Authors: Bradai, M., McCollum, C., Huckelhoven, R.

Date: 2025-12-05 · Version: 1
DOI: 10.64898/2025.12.04.692366

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The barley ROP protein RACB promotes susceptibility to the fungus Blumeria hordei by interacting with scaffold proteins, including RIPb. The study shows that the calcium‑dependent C2‑domain protein CARa binds RIPb, and that transient knockdown of CARa reduces, while its overexpression enhances, fungal haustorium accommodation, indicating CARa connects RACB‑RIPb signalling to membrane organization during infection.

RACB RIPb CARa Blumeria hordei Barley (Hordeum vulgare)

Pre-anthesis light signaling of sheathed embryonic barley inflorescences defines floral fate

Authors: Babanna, S. T., Huang, Y., P.M. Weber, A., Schnurbusch, T.

Date: 2025-12-02 · Version: 1
DOI: 10.64898/2025.12.01.691580

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study characterizes pre-anthesis embryonic inflorescence greening (PEIG) in barley as an early, light‑dependent chlorophyll accumulation that begins in the central rachis and spreads to spikelet primordia. Using chlorophyll autofluorescence imaging, quantification, and a non‑destructive dark‑treatment to block light, the authors show that inhibiting PEIG does not affect floral initiation but markedly reduces floral survival and pollen viability, especially at the spike tip. Natural variation analysis further links stronger PEIG with higher floral survival, highlighting its potential impact on cereal grain yield.

pre-anthesis embryonic inflorescence greening chlorophyll autofluorescence imaging light‑dependent chlorophyll accumulation floral survival and pollen viability Hordeum vulgare

Transcriptome and hormone regulations shape drought stress-dependent Fusarium Head Blight susceptibility in different barley genotypes

Authors: Hoheneder, F., Steidele, C. E., Gigl, M., Dawid, C., Hueckelhoven, R.

Date: 2025-11-25 · Version: 1
DOI: 10.1101/2025.11.23.689882

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

Four barley genotypes were examined under simultaneous Fusarium culmorum infection and drought, revealing genotype-dependent Fusarium Head Blight severity and largely additive transcriptomic responses dominated by drought. Co‑expression and hormone profiling linked ABA and auxin to stress‑specific gene modules, and a multiple linear regression model accurately predicted combined‑stress gene expression from single‑stress data, suggesting modular regulation.

Fusarium Head Blight drought stress barley hormone profiling transcriptome analysis

Barley (Hordeum vulgare) maintains tricarboxylic acid cycle activity without invoking the GABA shunt under salt stress

Authors: Bandehagh, A., Taylor, N. L.

Date: 2025-11-08 · Version: 1
DOI: 10.1101/2025.11.06.687118

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study investigated how barley (Hordeum vulgare) adjusts mitochondrial respiration under salinity stress using physiological, biochemical, metabolomic and proteomic approaches. Salt treatment increased respiration and activated the canonical TCA cycle, while the GABA shunt remained largely inactive, contrasting with wheat responses.

salinity stress mitochondrial respiration tricarboxylic acid cycle metabolomics proteomics

A subset of world barley collection was used in the identification of sources of resistance and marker-trait association for resistance for bacterial leaf streak

Authors: Velasco, D. D. P., Shi, G., Brueggeman, R. S., Horsley, R. D., Liu, Z., Baldwin, T. T.

Date: 2025-11-03 · Version: 1
DOI: 10.1101/2025.10.31.685662

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study evaluated 198 barley (Hordeum vulgare) accessions from the World Barley Core Collection for resistance to bacterial leaf streak caused by Xanthomonas translucens pv. translucens, identifying ten lines with consistently low disease severity over four years. Genome‑wide association analyses using multiple mixed models uncovered five robust marker‑trait associations, including loci on chromosomes 2H, 5H, and 7H that overlap with previously reported resistance regions, providing valuable resources for breeding BLS‑resistant barley.

bacterial leaf streak Xanthomonas translucens barley genome‑wide association study marker‑trait association

Golden Promise-rapid, a fast-cycling barley genotype with high transformation efficiency

Authors: Buchmann, G., Haraldsson, E. B., Schüller, R., Rütjes, T., Walla, A. A., von Korff Schmising, M., Liu, S.

Date: 2025-10-31 · Version: 1
DOI: 10.1101/2025.10.31.685778

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The authors created a fast‑cycling, isogenic barley line (GP‑rapid) by introgressing the wild‑type Ppd‑H1 allele from Igri into the Golden Promise cultivar and performing two backcrosses to limit the donor genome, achieving a 25% reduction in generation time under speed‑breeding conditions while retaining high transformation efficiency. CRISPR/Cas9‑mediated editing of Ppd‑H1 showed regeneration and transformation rates comparable to the original Golden Promise, establishing GP‑rapid as a rapid platform for transgenic and gene‑edited barley research.

Golden Promise Ppd-H1 speed breeding CRISPR/Cas9 transformation efficiency
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