Evaluation of combined root exudate and rhizosphere microbiota sampling approaches to elucidate plant-soil-microbe interaction
Authors: Escudero-Martinez, C., Browne, E. Y., Schwalm, H., Santangeli, M., Brown, M., Brown, L., Roberts, D. M., Duff, A. M., Morris, J., Hedley, P. E., Thorpe, P., Abbott, J. C., Brennan, F., Bulgarelli, D., George, T. S., Oburger, E.
Category: Plant Biology
Model Organism: Hordeum vulgare
▶ AI Summary
The study benchmarked several sampling approaches for simultaneous root exudate and rhizosphere microbiota profiling in soil‑grown barley, showing consistent exudate profiles but variable root morphology and nitrogen exudation across methods. High‑throughput amplicon sequencing revealed protocol‑specific effects on microbial composition, yet about 75% of enriched microbes were recovered by all approaches, supporting integrated exudate‑microbiota analyses.