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AI-summarized plant biology research papers from bioRxiv

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QTL for Heat-Induced Stomatal Anatomy Underpin Gas Exchange Variation in Field-Grown Wheat

Authors: Chaplin, E. D., Tanaka, E., Merchant, A., Sznajder, B., Trethowan, R., Salter, W. T.

Date: 2025-12-17 · Version: 1
DOI: 10.64898/2025.12.16.694723

Category: Plant Biology

Model Organism: Triticum aestivum

AI Summary

The study evaluated how stomatal anatomy and physiological efficiency influence wheat heat tolerance across multi‑environment field trials with 200 genotypes, using early versus delayed sowing to impose temperature stress. Findings revealed a decoupling between anatomical capacity (gsmax) and actual conductance (gs, gse) under heat, plastic shifts toward smaller, denser stomata, and identified 125 QTL linked to stomatal traits, suggesting targets for breeding climate‑resilient wheat.

stomatal conductance heat stress wheat (Triticum aestivum) QTL mapping stomatal anatomy

DNA methylation mediates transcriptional stability and transposon-driven trans-regulation under drought in wheat

Authors: Reynolds, I. J., Barratt, L. J., Harper, A. L.

Date: 2025-12-05 · Version: 1
DOI: 10.64898/2025.12.04.692301

Category: Plant Biology

Model Organism: Triticum aestivum

AI Summary

The study used paired whole‑genome bisulphite sequencing and RNA‑seq on wheat landraces to investigate how DNA methylation patterns change during drought stress, revealing antagonistic trends across cytosine contexts and a key demethylation role for ROS1a family members. Gene‑body methylation correlated positively with expression but negatively with stress‑responsive changes, while drought‑induced hyper‑methylation of specific transposable elements, especially the RLX_famc9 LTR retrotransposon, appears to modulate downstream gene regulation via siRNA precursors.

drought stress DNA methylation Triticum aestivum ROS1a demethylase transposable elements

Choosing the Best Route: Comparative Optimization of Wheat Transformation Methods for Improving Yield by Targeting TaARE1-D with CRISPR/Cas9

Authors: Tek, M. I., Budak Tek, K., Sarikaya, P., Ahmed, A. R., Fidan, H.

Date: 2025-09-12 · Version: 1
DOI: 10.1101/2025.09.11.675438

Category: Plant Biology

Model Organism: Triticum aestivum

AI Summary

The study optimized three wheat transformation methods—immature embryo, callus, and in planta injection—by systematically adjusting Agrobacterium strain, bacterial density, acetosyringone concentration, and incubation conditions, achieving transformation efficiencies up to 66.84%. Using these protocols, CRISPR/Cas9 knockout of the negative regulator TaARE1-D produced mutants with increased grain number, spike length, grain size, and a stay‑green phenotype, demonstrating the platform’s potential to accelerate yield and stress‑tolerance improvements in wheat.

Triticum aestivum CRISPR/Cas9 Agrobacterium-mediated transformation TaARE1-D yield improvement

Plant plasticity in the face of climate change - CO2 offsetting effects to warming and water deficit in wheat. A review.

Authors: Gawinowski, M., Chenu, K., Deswarte, J.-C., Launay, M., Bancal, M.-O.

Date: 2025-02-12 · Version: 1
DOI: 10.1101/2025.02.10.637370

Category: Plant Biology

Model Organism: Triticum aestivum

AI Summary

This review compiles experimental studies on wheat to assess how elevated CO₂, higher temperatures, and water deficit interact and affect productivity and water use. By calculating plasticity indices, the authors find that despite CO₂‑induced gains, overall yield generally declines under combined stress, while water consumption often decreases. They highlight the need for more data to improve and validate crop models under future climate scenarios.

elevated CO2 heat stress drought wheat plasticity indices