The study reveals that in the liverwort Marchantia polymorpha, the UV‑B photoreceptor MpUVR8 forms homodimers that monomerize and accumulate in the nucleus upon UV‑B exposure, activating COP1‑dependent growth inhibition, gene expression reprogramming, and UV‑absorbing metabolite production. MpRUP promotes redimerization of MpUVR8, acting as a negative regulator, while MpSPA also negatively modulates UVR8 signaling, indicating lineage‑specific diversification of UV‑B signaling components that originated over 400 Myr ago.
The study examines how ectopic accumulation of methionine in Arabidopsis thaliana leaves, driven by a deregulated AtCGS transgene under a seed‑specific promoter, reshapes metabolism, gene expression, and DNA methylation. High‑methionine lines exhibit increased amino acids and sugars, activation of stress‑hormone pathways, and reduced expression of DNA methyltransferases, while low‑methionine lines show heightened non‑CG methylation without major transcriptional changes. Integrated transcriptomic and methylomic analyses reveal a feedback loop linking sulfur‑carbon metabolism, stress adaptation, and epigenetic regulation.
The study mapped the cis‑regulatory landscape of the winter rapeseed cultivar Express617, identifying thousands of novel regulatory elements and characterizing super‑enhancers that are asymmetrically enriched in the Cn subgenome of Brassica napus. An in‑silico pipeline combining population‑level expression data and machine‑learning models revealed that many SE‑associated genes are expressed above predicted levels, and structural variants disrupting SEs lead to reduced gene expression, highlighting their functional importance for gene regulation and breeding.
The study investigates the role of the chromatin regulator MpSWI3, a core subunit of the SWI/SNF complex, in the liverwort Marchantia polymorpha. A promoter mutation disrupts male gametangiophore development and spermiogenesis, causing enhanced vegetative propagation, and transcriptomic analysis reveals that MpSWI3 regulates genes controlling reproductive initiation, sperm function, and asexual reproduction, highlighting its ancient epigenetic role in balancing vegetative and reproductive phases.
The study investigates the role of two ATP-binding cassette transporters, MpABCG1 and MpABCG36, in the sequestration of specialized metabolites within oil bodies of the liverwort Marchantia polymorpha. Loss‑of‑function mutants displayed reduced accumulation of sesquiterpenes and, specifically for MpABCG1, decreased levels of bis‑bibenzyls, while oil‑body formation remained largely unaffected, indicating these transporters are essential for metabolite accumulation rather than organelle biogenesis.
The study shows that inoculation with the non‑diazotrophic bacterium Enterobacter sp. SA187 significantly improves Arabidopsis thaliana growth under low nitrate conditions by increasing fresh weight, primary root length, and lateral root density, while enhancing nitrate accumulation and reducing shoot C:N ratios. Transcriptomic and mutant analyses reveal that these benefits depend on ethylene signaling and the activity of high‑affinity nitrate transporters NRT2.5 and NRT2.6, indicating an ethylene‑mediated, HATS‑dependent reprogramming of nitrogen uptake.
The study integrated 16 Arabidopsis thaliana whole‑genome bisulfite sequencing datasets from 13 stress experiments using a unified bioinformatic pipeline to map common and stress‑specific DNA methylation changes. Differentially methylated regions varied by stress type and methylation context, with CG DMRs enriched in gene bodies and CHG/CHH DMRs in transposable elements, some of which overlapped loci prone to stable epimutations. Gene ontology and TE enrichment analyses highlighted shared stress pathways and suggest environmental stress can generate heritable epigenetic variation.
The study reveals that Arabidopsis ethylene receptors ETR1 and ERS1 function as Ca²⁺-permeable channels, with ETR1 specifically mediating ethylene‑induced cytosolic Ca²⁺ spikes that influence hypocotyl elongation. Homologous receptors from diverse land plants and algae also show Ca²⁺ permeability, and ethylene further enhances this activity, indicating a conserved regulatory role across the green lineage.
Drought-Induced Epigenetic Memory in the cambium of Poplar Trees persists and primes future stress responses
Authors: DUPLAN, A., FENG, Y. Q., LASKAR, G., CAI, B. D., SEGURA, V., DELAUNAY, A., LE JAN, I., DAVIAUD, C., TOUMI, A., LAURANS, F., SOW, M. D., ROGIER, O., POURSAT, P., DURUFLE, H., JORGE, V., SANCHEZ, L., COCHARD, H., ALLONA, I., TOST, J., FICHOT, R., MAURY, S.
The study examined short‑term and transannual drought memory in cambium tissues of two Populus genotypes and four epitypes with modified DNA‑methylation machinery, revealing persistent hormone, transcript, and methylation changes one week after stress relief. Trees previously stressed in Year 1 displayed distinct physiological and molecular responses to a second drought in Year 2, indicating long‑term memory linked to stable CG‑context DNA methylation, with genotype‑dependent differences in plasticity and stability. These findings position the cambium as a reservoir for epigenetic stress memory and suggest exploitable epigenetic variation for tree breeding under drought.
The study demonstrates that ethylene signaling contributes to host resistance against the root parasitic plant Phelipanche aegyptiaca, as both water stress and parasitism activate ethylene responses in Arabidopsis roots. Application of the ethylene precursor ACC reduced parasite attachment, and mutants in ethylene signaling components (ETR1, CTR1) showed altered tolerance, highlighting ethylene-mediated defenses as a potential strategy for crop protection.