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AI-summarized plant biology research papers from bioRxiv

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Golden Promise-rapid, a fast-cycling barley genotype with high transformation efficiency

Authors: Buchmann, G., Haraldsson, E. B., Schüller, R., Rütjes, T., Walla, A. A., von Korff Schmising, M., Liu, S.

Date: 2025-10-31 · Version: 1
DOI: 10.1101/2025.10.31.685778

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The authors created a fast‑cycling, isogenic barley line (GP‑rapid) by introgressing the wild‑type Ppd‑H1 allele from Igri into the Golden Promise cultivar and performing two backcrosses to limit the donor genome, achieving a 25% reduction in generation time under speed‑breeding conditions while retaining high transformation efficiency. CRISPR/Cas9‑mediated editing of Ppd‑H1 showed regeneration and transformation rates comparable to the original Golden Promise, establishing GP‑rapid as a rapid platform for transgenic and gene‑edited barley research.

Golden Promise Ppd-H1 speed breeding CRISPR/Cas9 transformation efficiency

Spatial Coordination between Leaf Gradient and Temperature Response in Barley

Authors: Fernandez, E. C., Tu, G., Dai, W., Yang, S., Liu, Z., Grzybowski, M., Liang, Z.

Date: 2025-06-27 · Version: 1
DOI: 10.1101/2025.06.24.661333

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study used chlorophyll fluorescence imaging to map non-photochemical quenching (NPQ) gradients along barley leaf axes and found heat stress attenuates NPQ induction, revealing spatial heterogeneity in stress responses. Genome‑wide association and transcriptomic analyses identified candidate genes, notably HORVU.MOREX.r3.3HG0262630, that mediate region‑specific heat responses, highlighting pathways for improving cereal heat resilience.

Barley (Hordeum vulgare) heat stress chlorophyll fluorescence imaging NPQ kinetics GWAS

Spatial heterogeneity of disease infection attributable to neighbor genotypic identity in barley cultivars

Authors: Akram, I., Rohr, L., Shimizu, K. K., Shimizu-Inatsugi, R., Sato, Y.

Date: 2025-04-24 · Version: 1
DOI: 10.1101/2025.04.22.650038

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study applied Spatial Analysis of Field Trials with Splines (SpATS) and Neighbor Genome-Wide Association Study (Neighbor GWAS) to barley field data, revealing that neighboring genotypes contribute to spatial variation in disease damage. Neighbor GWAS identified variants on chromosome 7H that modestly affect net form net blotch and scald resistance, suggesting that genotype mixtures could mitigate pest damage.

spatial heterogeneity neighbor genotype effect barley disease resistance GWAS SpATS