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AI-summarized plant biology research papers from bioRxiv

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Root hair lifespan is antagonistically controlled by autophagy and programmed cell death

Authors: Feng, Q., Zhu, S., Wang, X., Liu, Y., Zhao, J., Dagdas, Y., Nowack, M. K.

Date: 2025-03-19 · Version: 1
DOI: 10.1101/2025.03.18.643910

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study reveals that root hair cells rely on elevated autophagy to extend their lifespan, and that loss-of-function mutations in autophagy genes ATG2, ATG5, or ATG7 trigger premature, cell-autonomous death mediated by NAC transcription factors ANAC046 and ANAC087. This uncovers an antagonistic interaction between autophagy and a developmentally programmed cell death pathway that controls root hair longevity, highlighting a potential target for improving nutrient and water uptake in crops.

root hair longevity autophagy ATG2 ATG5 ATG7 NAC transcription factors programmed cell death

Cell-type specific autophagy in root hair forming cells is essential for salt stress tolerance in Arabidopsis thaliana

Authors: Zhao, J., Loefke, C., Yeung, K. C., Chen, Y., Dagdas, Y.

Date: 2025-03-18 · Version: 1
DOI: 10.1101/2025.03.18.643786

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study reveals that root hair-forming trichoblast cells in Arabidopsis thaliana display higher autophagic flux than adjacent atrichoblast cells, a difference linked to cell fate determination. Elevated autophagy in trichoblasts is required for vacuolar sodium sequestration, contributing to salt‑stress tolerance, whereas disrupting autophagy in these cells impairs ion accumulation and survival. Cell‑type‑specific genetic complementation restores both autophagy and stress resilience, highlighting a developmental program that tailors autophagy for environmental adaptation.

autophagy trichoblast Arabidopsis thaliana salt stress cell-type-specific regulation

Stress drives plasticity in leaf maturation transcriptional dynamics

Authors: Swift, J., Wu, X., Xu, J., Jain, T., Illouz-Eliaz, N., Nery, J. R., Chory, J., Ecker, J. R.

Date: 2025-02-25 · Version: 1
DOI: 10.1101/2025.02.24.639183

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study constructs a ~1‑million‑cell single‑nuclei transcriptome atlas of Arabidopsis leaves to reveal that drought stress accelerates transcriptional programs associated with maturation and aging, thereby limiting leaf growth in proportion to stress intensity. Targeted upregulation of FERRIC REDUCTION OXIDASE 6 in mesophyll cells partially rescues leaf growth under drought, demonstrating the functional relevance of these transcriptional changes.

leaf development drought stress single-nucleus transcriptomics Arabidopsis thaliana cell-type specific gene upregulation

Lack of AtMC1 catalytic activity triggers autoimmunity dependent on NLR stability

Authors: Salguero-Linares, J., Armengot, L., Ayet, J., Ruiz-Solani, N., Saile, S., Salas-Gomez, M., Fernandez, E., Denolf, L., Navarrete, F., Krumbach, J., Kaiser, M., Stael, S., Van Breusegem, F., Gevaert, K., Kaschani, F., petersen, m., El Kasmi, F., Valls, M., Coll, N. S.

Date: 2025-02-03 · Version: 1
DOI: 10.1101/2025.01.31.635913

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study demonstrates that loss of Arabidopsis metacaspase 1 (AtMC1) triggers autoimmunity reliant on downstream NLR and PRR signaling, and that overexpressing a catalytically dead AtMC1 exacerbates this effect. Overexpression of the E3 ligase SNIPER1 restores normal immunity, suggesting that AtMC1 regulates NLR protein turnover, possibly via autophagic degradation of the inactive protein.

metacaspase 1 autoimmunity NLR homeostasis SNIPER1 autophagy
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