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AI-summarized plant biology research papers from bioRxiv

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Latest 2 Papers

Spatial Coordination between Leaf Gradient and Temperature Response in Barley

Authors: Fernandez, E. C., Tu, G., Dai, W., Yang, S., Liu, Z., Grzybowski, M., Liang, Z.

Date: 2025-06-27 · Version: 1
DOI: 10.1101/2025.06.24.661333

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

The study used chlorophyll fluorescence imaging to map non-photochemical quenching (NPQ) gradients along barley leaf axes and found heat stress attenuates NPQ induction, revealing spatial heterogeneity in stress responses. Genome‑wide association and transcriptomic analyses identified candidate genes, notably HORVU.MOREX.r3.3HG0262630, that mediate region‑specific heat responses, highlighting pathways for improving cereal heat resilience.

Barley (Hordeum vulgare) heat stress chlorophyll fluorescence imaging NPQ kinetics GWAS

Pangenome insights into structural variation and functional diversification of barley CCT motif genes

Authors: Zhu, Z., Stein, N.

Date: 2025-03-19 · Version: 1
DOI: 10.1101/2025.03.19.643958

Category: Plant Biology

Model Organism: Hordeum vulgare

AI Summary

Using a barley pangenome of 76 genotypes and a pan‑transcriptome subset of 20, the study characterizes the diversity and evolutionary dynamics of CCT motif genes, uncovering novel frameshift variants and clade‑specific domain expansions. Phylogenetic and tissue‑specific expression analyses reveal functional divergence among paralogs, and the unexpected retention of the VRN2 repressor in spring barley suggests additional regulatory mechanisms beyond vernalization.

CCT motif genes barley pangenome gene family diversification VRN2 floral repressor phylogenetic analysis