Latest 4 Papers

Effects of atmospheric CO2 levels on the susceptibility of maize to diverse pathogens

Authors: Khwanbua, E., Qi, Y., Ssengo, J., Liu, P., Graham, M. A., Whitham, S.

Date: 2026-01-02 · Version: 1
DOI: 10.64898/2025.12.31.697224

Category: Plant Biology

Model Organism: Zea mays

AI Summary

The study examined how elevated atmospheric CO₂ (550 ppm) affects immunity in the C₄ cereal maize (Zea mays L.) by exposing plants grown under ambient and elevated CO₂ to a range of pathogens. Elevated CO₂ increased susceptibility to sugarcane mosaic virus, decreased susceptibility to several bacterial and fungal pathogens, and left susceptibility to others unchanged, with reduced bacterial disease linked to heightened basal immune responses. These findings provide a baseline for future investigations into CO₂‑responsive defense mechanisms in C₄ crops.

elevated CO₂ maize plant immunity pathogen susceptibility C4 crops

Genome-wide Identification, Structural Features and Single-Cell Expression Atlas of the Carbonic Anhydrase Gene Family in Maize (Zea mays L.)

Authors: Gao, Y., Zhao, C.

Date: 2025-09-21 · Version: 1
DOI: 10.1101/2025.09.21.677582

Category: Plant Biology

Model Organism: Zea mays

AI Summary

The study provides a comprehensive genome-wide catalog and single‑cell expression atlas of the carbonic anhydrase (CA) gene family in maize, identifying 18 CA genes across α, β, and γ subfamilies and detailing their structural and regulatory features. Phylogenetic, synteny, promoter motif, bulk tissue RNA‑seq, and single‑cell RNA‑seq analyses reveal distinct tissue and cell‑type specific expression patterns, highlighting β‑CAs as key players in C4 photosynthesis and γ‑CAs in ion/pH buffering, and propose cell‑type‑specific CA genes as targets for improving stress resilience.

carbonic anhydrases maize single-cell RNA‑seq phylogenetic analysis stress resilience

Archaeological Bolivian maize genomes suggest Inca cultural expansion augmented maize diversity in South America

Authors: Chen, H., Baetsen-Young, A., Thompson, A., Day, B., Madzima, T., Wasef, S., Rivera Casanovas, C., Lovis, W., Wrobel, G.

Date: 2025-04-01 · Version: 1
DOI: 10.1101/2025.03.31.646424

Category: Plant Biology

Model Organism: Zea mays

AI Summary

The study analyzes ancient maize genomes from a 500–600 BP Bolivian offering and compares them with 16 archaeological samples spanning 5,000 years and 226 modern Zea mays lines, revealing close genetic affinity to ancient Peruvian maize and increased diversity during Inca‑local interactions. Phylogenetic and phenotypic analyses of ovule development indicate targeted breeding for seed quality and yield, suggesting culturally driven selection was already established by the 15th century CE.

ancient maize biocultural selection Inca agriculture phylogenetic analysis seed traits

Temporal analysis of physiological phenotypes identifies novel metabolic and genetic underpinnings of senescence in maize

Authors: Brar, M. S., Kumar, R., Kunduru, B., McMahan, C. S., Tharayil, N., Sekhon, R. S.

Date: 2025-03-12 · Version: 1
DOI: 10.1101/2025.03.07.641920

Category: Plant Biology

Model Organism: Zea mays

AI Summary

The study generated a temporal physiological and metabolomic map of leaf senescence in diverse maize inbred lines differing in stay‑green phenotype, identifying 84 metabolites associated with senescence and distinct metabolic signatures between stay‑green and non‑stay‑green lines. Integration of metabolite data with genomic information uncovered 56 candidate genes, and reverse‑genetic validation in maize and Arabidopsis demonstrated conserved roles for phenylpropanoids such as naringenin chalcone and eriodictyol in regulating senescence.

leaf senescence staygreen metabolomics phenylpropanoids maize