The study presents a high-quality genome assembly for the nickel hyperaccumulator Noccaea caerulescens and uses it as a reference for comparative transcriptomic analyses across different N. caerulescens accessions and the non‑accumulating relative Microthlaspi perfoliatum. It identifies a limited set of metal transporters (NcHMA3, NcHMA4, NcIREG2, and NcIRT1) whose elevated expression correlates with hyperaccumulation, and demonstrates that frameshift mutations in NcIRT1 can abolish the trait, indicating an ancient, transporter‑driven origin of nickel hyperaccumulation.

The study identifies the transcription factor MdBRC1 as a key inhibitor of bud growth during the ecodormancy phase in apple (Malus domestica), directly regulating dormancy‑associated genes and interacting with the flowering promoter MdFT2 to modulate bud break. Comparative transcriptomic analysis and gain‑of‑function experiments in poplar demonstrate that MdFT2 physically binds MdBRC1, attenuating its repressive activity and acting as a molecular switch for the transition to active growth.

The study engineers Type‑B response regulators to alter their transcriptional activity and cytokinin sensitivity, enabling precise modulation of cytokinin‑dependent traits. Using tissue‑specific promoters, the synthetic transcription factors were deployed in Arabidopsis thaliana to reliably increase or decrease lateral root numbers, demonstrating a modular platform for controlling developmental phenotypes.

The study profiled root transcriptomes of Arabidopsis wild type and etr1 gain-of-function (etr1-3) and loss-of-function (etr1-7) mutants under ethylene or ACC treatment, identifying 4,522 ethylene‑responsive transcripts, including 553 that depend on ETR1 activity. ETR1‑dependent genes encompassed ethylene biosynthesis enzymes (ACO2, ACO3) and transcription factors, whose expression was further examined in an ein3eil1 background, revealing that both ETR1 and EIN3/EIL1 pathways regulate parts of the network controlling root hair proliferation and lateral root formation.

The study introduced full-length SOC1 genes from maize and soybean, and a partial SOC1 gene from blueberry, into tomato plants under constitutive promoters. While VcSOC1K and ZmSOC1 accelerated flowering, all three transgenes increased fruit number per plant mainly by promoting branching, and transcriptomic profiling revealed alterations in flowering, growth, and stress‑response pathways.

The study investigates the function of two GT47B arabinan arabinosyltransferases in the liverwort Marchantia polymorpha, generating loss‑of‑function and overexpression lines to assess cell wall composition. Using CoMPP, glycosyl linkage analysis, and LM6 immunolabelling, the authors found that MpARADL2 mutants have reduced 1,5‑L‑arabinan epitopes in elaters despite unchanged overall 5‑linked Araf levels, suggesting additional enzymes compensate in thallus tissue. Attempts to express and purify the enzymes in HEK293 cells failed, implying a clade‑specific solubility requirement and highlighting the need to identify interacting partners.

The study characterizes the composition and structure of cell wall glycans in eight tissue types of the liverwort Marchantia polymorpha, revealing both typical land‑plant features and unique traits such as abundant (1,5)-arabinan in sporophytes and low overall pectin levels. Comparative genomic analysis shows a diversified glycosyltransferase repertoire relative to Arabidopsis, and the authors created a Gateway‑compatible library of 93 M. polymorpha GTs to facilitate future functional studies.

The authors identified MpCAFA, a protein combining CAPS-like and FAP115-like domains, as a key factor for rapid ciliary swimming in the liverwort Marchantia polymorpha spermatozoids. Loss-of-function mutants displayed markedly reduced swimming speed despite normal axoneme structure, chemotaxis, and fertility, and these defects were rescued by a MpCAFA‑mCitrine fusion that localized along the entire cilium. Both the CAPS-like and FAP115-like regions are required for MpCAFA’s function and ciliary targeting, establishing it as a major ciliary protein and a marker for visualizing spermatozoid motility.

The study investigated meristem activation in the liverwort Marchantia polymorpha, revealing that simulated shade causes alternating inactivity of meristems. Transcriptomic comparison of active versus inactive meristems identified the cytochrome P450 monooxygenase MpCYP78E1 as an inhibitor of meristem activity and initiation, with loss- and gain-of-function mutants confirming its regulatory role in shoot branching architecture.

The study demonstrates that MYB‑bHLH‑WDR transcriptional complexes (MBW) are present in the liverwort Marchantia polymorpha, indicating that such complexes originated before the diversification of land plants. Functional analyses reveal that two MYB paralogs, MpMYB14 and MpMYB02, rely on a single bHLH partner (MpbHLH12) to regulate flavonoid biosynthesis and liverwort‑specific oil body maturation, suggesting an ancestral role in pigment production and a derived role in organelle development.