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AI-summarized plant biology research papers from bioRxiv

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Large-Scale Multigenome-Wide Study Predicts the Existence of Transmembrane Phosphotransfer Proteins in Plant MSP Signaling Pathway

Authors: Lomin, S. N., Brenner, W. G., Savelieva, E. M., Arkhipov, D. V., Romanov, G. A.

Date: 2025-07-31 · Version: 1
DOI: 10.1101/2025.07.28.667123

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

Large-scale bioinformatics identified a new class of transmembrane phosphotransfer proteins (TM‑HPt) across 61 plant species, showing conserved HPt motifs and potential activity in multistep phosphorelay signaling. Phylogenetic relationships were inferred via Bayesian DNA analysis, expression was validated by transcriptomics, and molecular modeling suggested possible membrane-associated structural arrangements.

transmembrane HPt proteins multistep phosphorelay phylogenetic analysis molecular modeling plant signaling

Evolutionary origin and functional diversification of plant GBF1-type ARF guanine-nucleotide exchange factors

Authors: Singh, M. K., Lauster, T., Huhn, K., Richter, S., Kientz, M., Neher, R. A., Juergens, G.

Date: 2025-06-06 · Version: 1
DOI: 10.1101/2025.06.03.657657

Category: Plant Biology

Model Organism: Arabidopsis thaliana

AI Summary

The study reconstructed the evolutionary history of plant-specific GBF1-type ARF-GEFs by building phylogenetic trees and ortho‑synteny groups, identifying orthologs of AtGNOM and AtGNL1 across species. Functional analyses using transgenic Arabidopsis lines and yeast two‑hybrid assays revealed how duplication and loss events diversified GNOM paralogs, separating polar recycling from secretory trafficking functions.

GBF1-type ARF‑GEF phylogenetic analysis ortho‑synteny polar recycling yeast two‑hybrid