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AI-summarized plant biology research papers from bioRxiv

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Membrane-binding domains define REMORIN phylogeny and provide a predicted structural basis for distinctive membrane nano-environments

Authors: Biermann, D., Gronnier, J.

Date: 2025-12-23 · Version: 1
DOI: 10.64898/2025.12.22.695504

Category: Plant Biology

Model Organism: General

AI Summary

The study reveals that REMORIN protein evolution is primarily driven by diversification of their conserved C-terminal domain, defining four major clades. Structural bioinformatics predicts a common membrane‑binding interface with diverse curvatures and lengths, and suggests that some REMs can form C‑terminal‑mediated oligomers, adding complexity to membrane organization.

REMORIN proteins C-terminal domain membrane nano-organization phylogenetic analysis structural bioinformatics

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1
DOI: 10.64898/2025.12.13.694100

Category: Plant Biology

Model Organism: General

AI Summary

The authors used a bottom‑up thermodynamic modelling framework to investigate how plants decode calcium signals, starting from Ca2+ binding to EF‑hand proteins and extending to higher‑order decoding modules. They identified six universal Ca2+-decoding modules that can explain variations in calcium sensitivity among kinases and provide a theoretical basis for interpreting calcium signal amplitude and frequency in plant cells.

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

Spatiotemporal Analysis Reveals Mechanisms Controlling Reactive Oxygen Species and Calcium Interplay Following Root Compression

Authors: Vinet, P., Audemar, V., Durand-Smet, P., Frachisse, J.-M., Thomine, S.

Date: 2025-10-23 · Version: 1
DOI: 10.1101/2025.10.22.683952

Category: Plant Biology

Model Organism: General

AI Summary

Using a microfluidic valve rootchip, the study simultaneously tracked ROS and calcium dynamics in compressed roots and found three kinetic phases linking mechanosensitive channel activity, NADPH oxidase‑dependent ROS accumulation, and secondary calcium influx. Pharmacological inhibition revealed that a fast calcium response is mediated by plasma‑membrane mechanosensitive channels, while a slower calcium increase is driven by ROS production.

mechanotransduction reactive oxygen species calcium signaling microfluidic compression root biology

The Rapid Mechanically Activated (RMA) channel transduces increases in plasma membrane tension into transient calcium influx

Authors: Guerringue, Y., Thomine, S., Allain, J.-M., Frachisse, J.-M.

Date: 2025-08-07 · Version: 1
DOI: 10.1101/2025.08.06.668926

Category: Plant Biology

Model Organism: General

AI Summary

The study characterizes a plasma membrane-localized, calcium‑permeable force‑gated channel named Rapid Mechanically Activated (RMA) in plants, using patch‑clamp and pressure‑clamp to elucidate its rapid activation, inactivation, and irreversible adaptation upon repeated mechanical stimulation. Kinetic modeling shows the channel functions as a pass‑band filter for frequencies between 10 Hz and 1 kHz, supporting its role in transducing high‑frequency mechano‑stimuli such as insect vibrations.

mechanically activated calcium channel RMA channel calcium signaling high‑frequency mechanical stimulation kinetic modeling