Keywords: decoding modules, CO2-fixing enzyme, SNP array, transcriptome reprogramming, tomato, genetic diversity

Latest 34 Papers

Scaling up orphan crop research: A global genetic perspective of cowpea (Vigna unguiculata) diversity from 10,617 accessions

Authors: Pearson, S. M., Hathorn, A., Sun, S., Cruickshank, A., Shatte, T. L., Munisse, P., Macharia, M., Conner, J., Koltunow, A. M. G., Vielle-Calzada, J. P., Ozias-Akins, P., Ishii, T., Dell Acqua, M., Norton, S., Tao, Y., Jordan, D., Mace, E.

Date: 2025-11-05 · Version: 1

DOI: 10.1101/2025.11.03.686174

Model Organism: Vigna unguiculata

cowpea genetic diversity genotyping-by-sequencing germplasm collections population structure

Population genomic structure of sorghum landraces across landscape, environment and culture

Authors: Vasquez Cerda, E. E., Bellis, E. S., Das, A., Slayton, E. R., Morris, G. P., Lasky, J. R.

Date: 2025-11-04 · Version: 1

DOI: 10.1101/2025.11.02.686151

Model Organism: Sorghum bicolor

Sorghum bicolor population genomics human travel time linguistic structure genetic diversity

Methionine Triggers Metabolic, Transcriptional, and Epigenetic Reprogramming in Arabidopsis Leaves

Authors: Yerushalmy, Y., Dafni, M., Rabach, N., Hacham, Y., Amir, R.

Date: 2025-11-03 · Version: 1

DOI: 10.1101/2025.11.02.686087

Model Organism: Arabidopsis thaliana

methionine metabolism Arabidopsis thaliana DNA methylation transcriptome reprogramming stress hormone pathways

Discovery of tomato UDP-glucosyltransferases involved in bioactive jasmonate homeostasis using limited proteolysis-coupled mass spectrometry

Authors: Venegas-Molina, J., Mohnike, L., Selma Garcia, S., Janssens, H., Colembie, R., Kimpe, I., Jaramillo-Madrid, A. C., Lacchini, E., Winne, J. M., Van Damme, P., Feussner, I., Goossens, A., Sola, K.

Date: 2025-10-15 · Version: 1

DOI: 10.1101/2025.10.15.682356

Model Organism: Solanum lycopersicum

jasmonic acid limited proteolysis‑coupled mass spectrometry UDP‑glucuronosyltransferase JA catabolism tomato

Mammalian growth-regulating factors enhance regeneration of recalcitrant transgenic tomato accessions

Authors: Garchery, C., Benejam, J., Grau, A., Gricourt, J., Pelpoir, E., Causse, M.

Date: 2025-09-29 · Version: 1

DOI: 10.1101/2025.09.25.678568

Model Organism: Solanum lycopersicum

CRISPR-Cas9 plant regeneration mammalian growth factors cytokines tomato

SlATG8f enhances tomato thermotolerance and fruit quality via autophagy and HS pathways

Authors: Cheng, q., Xu, w., wen, c., He, Z., Song, L.

Date: 2025-09-25 · Version: 1

DOI: 10.1101/2025.09.23.678159

Model Organism: Solanum lycopersicum

SlATG8f autophagy high-temperature stress tomato fruit quality

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Repressed expression of nucleoporins and importins impairs plant defense against an infectious noncoding RNA

Authors: Wang, Y., Fang, Y., Merritt, B. A., Liu, B., Gu, Y., Mou, Z., Wang, Y., Hao, J.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.19.677415

Model Organism: Solanum lycopersicum

viroid nucleoporins NPR1 salicylic acid analog tomato

Population structure and diversity of common bean (Phaseolus vulgaris L.) landraces in the Peruvian Amazon

Authors: Tobaru, J., Barrera-Lozano, M., Vecco-Giove, C. D., Pelaez, J., Pinchi, M., Vargas, Y., Chuquillanqui, J., Soto-Torres, J., Robles, R., Saravia, D., Petroli, C., Etchevers, J. D., Ortiz, R., Blas, R.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.04.674357

Model Organism: Phaseolus vulgaris

Phaseolus vulgaris Amazonian landraces genetic diversity DArTseq SNP genotyping breeding resources

Pseudomonas aeruginosa SPT08, a tomato endophyte, improves plant growth and controls bacterial wilt in tomato

Authors: Giri, S. J., Rana, R., Sharma, P. L., Begum, S., Dutta, L., Kalita, S., Bhuyan, S., Jain, M., Agarwala, N., Patil, P. B., Ray, S. K.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.17.670768

Model Organism: Solanum lycopersicum

Pseudomonas aeruginosa tomato bacterial wilt endophyte plant growth promotion

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