Keywords: decoding modules, CO2-fixing enzyme, host range, transcriptomics, SWI3, Zea mays

Latest 62 Papers

Candidatus Phytoplasma-induced Retrogressive Morphogenesis in Sesame (Sesamum indicum L.): Tissue-Specific Metabolic and Transcriptomic Reprogramming

Authors: Banerjee, S., Gangopadhyay, G.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.29.679221

phytoplasma infection Sesamum indicum metabolomics transcriptomics tissue-specific response

The host range paradox of Meloidogyne incognita: a physiological and transcriptomic analysis of nine susceptible interactions across six plant orders

Authors: Moura de Souza, V. H., Pellegrin, C., Hanlon, V. C. T., Xia, C., Kranse, O. P., Sonawala, U., Desikan, P., Senatori, B., Danchin, E. G. J., Derevnina, L., Eves-van den Akker, S.

Date: 2025-09-29 · Version: 1

DOI: 10.1101/2025.09.26.678250

Model Organism: Multi-species

Meloidogyne incognita host range cross‑kingdom transcriptome effector deployment host specificity

Aphid-derived cross-kingdom RNA dynamics underpin maize resistance

Authors: Jiang, S., Zhang, Z., Liu, C., Zhu, Y., Kou, Y., Yang, P., Hu, Z., Wu, J., Wang, Y., Wan, F., Wu, G., Chen, Y.

Date: 2025-09-28 · Version: 1

DOI: 10.1101/2025.09.25.678037

Model Organism: Zea mays

aphid long non‑coding RNA cross‑kingdom effectors Zea mays RNA interference

Spatial inheritance patterns across maize ears are associated with alleles that reduce pollen fitness

Authors: Ruggiero, D., Bang, M., Leary, M., Flieg, H., Garcia-Lamas, L., Vejlupkova, Z., Megraw, M., Jiang, D., Leiboff, S., Fowler, J. E.

Date: 2025-09-20 · Version: 1

DOI: 10.1101/2025.09.17.676879

Model Organism: Zea mays

pollen fitness spatial inheritance Ds‑GFP mutants computer vision phenotyping Zea mays

Light on its feet: Acclimation to high and low diurnal light is flexible in Chlamydomonas reinhardtii

Authors: Dupuis, S., Chastain, J. L., Han, G., Zhong, V., Gallaher, S. D., Nicora, C. D., Purvine, S. O., Lipton, M. S., Niyogi, K. K., Iwai, M., Merchant, S. S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.28.672467

Model Organism: Chlamydomonas reinhardtii

photoprotection diurnal light acclimation thylakoid ultrastructure transcriptomics proteomics

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

Partial retention of ancient function increases genetic pleiotropy in grass evolution

Authors: de Neve, A. E., Kelly, O. A., Kelly, T., Leiboff, S., Bartlett, M. E.

Date: 2025-08-23 · Version: 1

DOI: 10.1101/2025.08.22.670905

Model Organism: Zea mays

genetic pleiotropy axillary meristem suppression floral organ suppression high-throughput quantitative phenotyping Zea mays

Non-catalytic and catalytic TREHALOSE-6-PHOSPHATE SYNTHASES interact with RAMOSA3 to control maize development.

Authors: Tran, T., Claeys, H., Abraham Juarez, M. J., Vi, L. S., Xu, X., Michalski, K., Chou, T. H., Iohannes, S. D., Boumpas, P., Williams, Z., Sheppard, S., Griffiths, C., Paul, M., Furukawa, H., Jackson, D.

Date: 2025-08-12 · Version: 1

DOI: 10.1101/2025.08.09.669499

Model Organism: Zea mays

Trehalose-6-phosphate non‑catalytic TPS Zea mays protein complex developmental regulation

ZmCRY1s interact with GL2 in a blue light dependent manner to regulate epidermal wax composition in Zea mays

Authors: Zhao, Z., Feng, F., Liu, Y., Liu, Y., Wang, F., Ni, Y., Liang, H., Hu, W., Wang, S., Hao, Y., Li, X., Li, J., Wang, J., Zhang, P., Liu, H.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.06.668858

Model Organism: Zea mays

cryptochrome Zea mays blue light signaling UV-B tolerance epidermal wax biosynthesis

A sublethal drought and rewatering time course reveals intricate patterning of responses in the annual Arabidopsis thaliana

Authors: Fitzek-Campbell, E., Psaroudakis, D., Weisshaar, B., Junker, A., Braeutigam, A.

Date: 2025-07-27 · Version: 1

DOI: 10.1101/2025.07.25.666782

Model Organism: Arabidopsis thaliana

drought stress Arabidopsis thaliana transcriptomics high‑throughput phenotyping biomarker transcripts

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