Keywords: decoding modules, CO2-fixing enzyme, machine learning, cell wall remodeling

Latest 19 Papers

Integrating Load-Cell Lysimetry and Machine Learning for Prediction of Daily Plant Transpiration

Authors: Friedman, S., Averbuch, N., Nevo, T., Moshelion, M.

Date: 2025-06-30 · Version: 2

DOI: 10.1101/2024.11.24.625038

daily transpiration machine learning gravimetric load cells Random Forest XGBoost

Cell layer-specific modification of cell wall is associated with exo-mesocarp split in pistachio (Pistacia vera L.)

Authors: Zhang, S., Wang, M., Eagle, S., Chernikova, A., Bedell, K. M., Tran, P., Lee, C., Adaskaveg, J. A., Wei, Y., Lopez, R., Basco, A., Gordon, P., Blanco-Ulate, B., Monroe, G., Drakakaki, G.

Date: 2025-06-24 · Version: 1

DOI: 10.1101/2025.06.18.660460

Model Organism: Pistacia vera

Pistacia vera hull development cell wall remodeling pectin modification fruit split layer-specific cell expansion

Endophytes induce systemic spatial reprogramming of metabolism in poplar roots under drought

Authors: Aufrecht, J. A., Velickovic, D., Tournay, R., Couvillion, S. P., Balasubramanian, V. K., Winkler, T., Herrera, D., Stanley, R., Doty, S., Ahkami, A. H.

Date: 2025-06-06 · Version: 1

DOI: 10.1101/2025.06.02.657501

Model Organism: General

beneficial endophytes drought stress root metabolome chemical imaging machine learning

Galactan mobilization during carbon starvation compromises cell wall-mediated fungal resistance in Arabidopsis

Authors: Reckleben, L., Morton, R. N., Munzert-Eberlein, K. S., Thiel, S., Rautengarten, C., Tan, V., Harres, K. L., Zanoni, L., Ebert, B., Engelsdorf, T.

Date: 2025-06-01 · Version: 1

DOI: 10.1101/2025.05.28.656597

Model Organism: Arabidopsis thaliana

cell wall remodeling galactose salvage dark‑induced starvation Arabidopsis thaliana pathogen penetration resistance

Multiplexed profiling of transcriptional regulators in plant cells

Authors: Alamos, S., Waldburger, L., Dee, A., Owens, L., Rattan, R., Ong, S., Shih, P.

Date: 2025-05-14 · Version: 1

DOI: 10.1101/2025.05.12.653590

Model Organism: General

transcriptional regulation high-throughput plant assay protein‑coding library machine learning synthetic protein engineering

Phylogenetic Analysis and Machine Learning Identify Signatures of Selection and Predict Deleterious Mutations in Common Bean

Authors: Cordoba-Novoa, H. A., Buckler, E. S., Romay, C., Berthel, A., Johnson, L., Balasubramanian, P., Hoyos Villegas, V.

Date: 2025-05-06 · Version: 1

DOI: 10.1101/2025.05.05.652309

Model Organism: Phaseolus vulgaris

deleterious mutations genetic load common bean MAGIC population machine learning

S2-PepAnalyst: A Web Tool for Predicting Plant Small Signalling Peptides

Authors: Vomo Donfack, K. L., Abaach, M., Luna, A. M., Ginot, G., Doblas, V. G., Morilla, I.

Date: 2025-05-06 · Version: 2

DOI: 10.1101/2024.08.02.606319

Model Organism: General

small signalling peptides machine learning protein language models geometric-topological analysis reinforcement learning

High Density Phenotypic Map of Natural Variation for Intermediate Phenotypes Associated with Stalk Lodging Resistance in Maize

Authors: Kunduru, B., Bokros, N. T., Tabaracci, K., Kumar, R., Brar, M. S., Stubbs, C. J., Oduntan, Y., DeKold, J., Bishop, R. H., Woomer, J., Verges, V. L., McDonald, A., McMahan, C. S., DeBolt, S., Robertson, D. J., Sekhon, R.

Date: 2025-04-06 · Version: 1

DOI: 10.1101/2025.04.03.647088

Model Organism: Zea mays

stalk lodging resistance maize phenomics genetic architecture intermediate phenotypes machine learning

Sunflower yield modeling with XAI: Historical weather impacts and forecasting

Authors: Majumder, S., Mason, C.

Date: 2025-02-28 · Version: 1

DOI: 10.1101/2025.02.27.640573

Model Organism: Helianthus annuus

explainable AI sunflower yield climate variability machine learning Shared Socioeconomic Pathways

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