Keywords: decoding modules, SNP array, AtSF1, RNA sequencing

Latest 11 Papers

Multi-Level Characterization Reveals Divergent Heat Response Strategies Across Wheat Genotypes of Different Ploidy

Authors: Arenas-M, A., Mino, I., Uauy, C., Calderini, D. F., Canales, J.

Date: 2026-01-23 · Version: 1

DOI: 10.64898/2026.01.22.701169

heat stress wheat ploidy RNA sequencing differential gene expression alternative splicing

In vivo binding by Arabidopsis SPLICING FACTOR 1 shifts 3' splice site choice, regulating circadian rhythms and immunity in plants

Authors: Agrofoglio, Y. C., Iglesias, M. J., de Leone, M. J., Hernando, C. E., Lewinski, M., Torres, S. B., Contino, G., Yanovsky, M. J., Staiger, D., Mateos, J. L.

Date: 2025-12-17 · Version: 1

DOI: 10.64898/2025.12.17.693997

Model Organism: Arabidopsis thaliana

alternative splicing branch point recognition AtSF1 circadian clock regulation plant immunity

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

Time- and space-resolved regulatory circuits in Arabidopsis thaliana

Authors: Zenker, S., Schiller, K., Braeutigam, A.

Date: 2025-10-24 · Version: 1

DOI: 10.1101/2025.10.23.684094

Model Organism: Arabidopsis thaliana

intermediate regulatory proteins temporal expression dynamics Arabidopsis thaliana RNA sequencing circadian regulation

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Transcriptional response to warm temperatures is confounded by organ-specificity

Authors: Hua, J., Gupta, S., Reis, R. S.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.05.668523

Model Organism: Arabidopsis thaliana

thermomorphogenesis organ-specific transcription RNA sequencing Differential gene expression Proteomics

Nucleotide sequence analysis reveals the presence of PVY-Tam isolates affecting tamarillo in Colombia

Authors: Martinez-Moncayo, C., Burbano-Lagos, T. C., Ontanon, C., Ferriol, I., Lopez-Moya, J. J., Uranga, M.

Date: 2025-07-18 · Version: 1

DOI: 10.1101/2025.07.18.664922

Model Organism: Solanum betaceum

Tamarillo (Solanum betaceum)virome Torradovirus Potato virus Y (PVY‑Tam)RNA sequencing

Transcriptomic stress responses in Vaccinium spp. F1 hybrids: Implications for temperature-resilient cranberry breeding using a crop wild relative

Authors: Dickinson, A., Kubal, J., Allsing, N., Murray, E. R., Michael, T. P., Polashock, J. J.

Date: 2025-07-11 · Version: 1

DOI: 10.1101/2025.07.08.662648

Model Organism: Vaccinium macrocarpon

Vaccinium macrocarpon V. oxycoccos cold stress RNA sequencing introgression breeding

Transcriptomic analysis of genotypes derived from Rosa wichurana unveils molecular mechanisms associated with quantitative resistance to Diplocarpon rosae

Authors: Lambelin, L., Thouroude, T., Jeauffre, J., Chameau, J., Vilfroy, C., Boursier, C., Aubourg, S., Pelletier, S., Lopez Arias, D. C., Hibrand-Saint Oyant, L., Soufflet-Freslon, V., Foucher, F., Paillard, S.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.13.659350

Model Organism: Rosa

black spot disease Diplocarpon rosae quantitative trait loci RNA sequencing plant defense response

AarMIXTAs: key factors of T-shaped non-glandular trichome development in Artemisia argyi

Authors: Chen, X., Wu, D., Li, C., Liao, B., Shen, Q.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.06.641095

Model Organism: Artemisia argyi

T-shaped non-glandular trichomes Artemisia argyi AarMIXTA transcription factors RNA sequencing Arabidopsis thaliana transgenic overexpression

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