Keywords: decoding modules, SNP array, DDM1, ascorbate, grapevine downy mildew

Latest 10 Papers

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Major alleles of CDCA7α shape CG-methylation in Arabidopsis thaliana

Authors: Bourguet, P., Lorkovic, Z. J., Casado, D. K., Bapteste, V., Cho, C. H., Igolkina, A., Lee, C.-R., Nordborg, M., Berger, F., Sasaki, E.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.03.673934

Model Organism: Arabidopsis thaliana

DNA methylation CG methylation (mCG)CDCA7 DDM1 local adaptation

A multivirulent Plasmopara viticola strain from Cilaos on Reunion Island breaks down Rpv1, Rpv3.1 and Rpv10 mediated resistance of grapevine

Authors: Ramirez Martinez, J. M., Miclot, A.-S., DVORAK, E., Mazet, I. D., Couture, C., Deliere, L., Fabre, F., Hoarau, I., Yobregat, O., Foulongne-Oriol, M., Delmotte, F.

Date: 2025-09-05 · Version: 1

DOI: 10.1101/2025.09.02.673614

Model Organism: Vitis vinifera

Plasmopara viticola grapevine downy mildew Rpv resistance loci virulence breakdown whole-genome sequencing

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

Parallel adaptation and admixture drive the evolution of virulence in the grapevine downy mildew pathogen

Authors: DVORAK, E., DUMARTINET, T., MAZET, I. D., CHATAIGNER, A., Paineau, M., CANTU, D., MESTRE, P., FOULONGNE-ORIOL, M., DELMOTTE, F.

Date: 2025-05-23 · Version: 1

DOI: 10.1101/2025.05.18.654733

Model Organism: Plasmopara viticola

Plasmopara viticola grapevine downy mildew QTL mapping AvrRpv12 RXLR effectors

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Direct quantitative assessment using digital droplet PCR and field-scale spatial distribution of Plasmopara viticola oospores in vineyard soil

Authors: Poeydebat, C., Courchinoux, E., Demeaux, I., Rodriguez, M., Chataigner, A., Lelievre, M., Goutouly, J.-P., Rossi, J.-P., Raynal, M., Deliere, L., Francois, D.

Date: 2025-05-12 · Version: 2

DOI: 10.1101/2024.07.29.605284

Model Organism: Vitis vinifera

Plasmopara viticola oospore quantification digital droplet PCR grapevine downy mildew soil inoculum

Identification of QTLs linked to partial resistance to foot and root rot caused by Fusarium avenaceum and Fusarium oxysporum in faba bean (Vicia faba)

Authors: Webb, A., Thomas, J. E., Davis, H., McAdam, S., Angra, D., O'Sullivan, D. M., Gostkiewicz, K., Capozzi, M., Wood, T. A.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.21.639454

Model Organism: Vicia faba

Vicia faba Fusarium foot and root rot QTL mapping SNP array disease resistance

Loss of RdDM-independent CHH methylation is sufficient for disruption of chromosome-specific rRNA gene silencing

Authors: McKinlay, A., Enganti, R., Puppala, N. V., Saradadevi, G. P., Blevins, T., Mohannath, G.

Date: 2025-02-20 · Version: 3

DOI: 10.1101/2023.02.03.526984

Model Organism: Arabidopsis thaliana

CHH methylation rRNA gene silencing Nucleolus organizer region (NOR)CMT2 DDM1