Keywords: decoding modules, SNP array, ELF3, ELF4 function, transcriptomic analysis, lateral root development, GWAS

Latest 38 Papers

Key molecular and cellular events of table olive fruit abscission zone formation during natural maturation and after ethephon treatment

Authors: Wang, M., Santos, E., Eagle, S., Chernikova, A., Zhang, S., Tran, P., Marino, G., Jernstedt, J., Niederholzer, F., Wheeler-Dykes, B., Wilkop, T., Ferguson, L., Drakakaki, G.

Date: 2025-11-12 · Version: 1

DOI: 10.1101/2025.11.10.687704

Model Organism: Olea europaea

abscission zone Olea europaea transcriptomic analysis cell wall remodeling alkalinization

Integrating image-based phenotyping and GWAS to map tolerance to Spittlebug nymphs in interspecific Urochloa grasses

Authors: Espitia-Buitrago, P., Perea, C., Mejia-Medina, J. C., Hernandez, L. M., Castiblanco, V., Ryan, C., De Vega, J. J., Jauregui, R. N.

Date: 2025-11-05 · Version: 1

DOI: 10.1101/2025.11.03.686394

Model Organism: Urochloa spp.

Urochloa spittlebug tolerance GWAS QTL image-based phenotyping

Development alters genotype-environment interactions and shapes adaptation in Arabidopsis

Authors: Lawrence-Paul, E. H., Janakiraman, J., Lawrence-Paul, M. R., Ben-Zeev, R., Xu, Y., Penn, A., Lasky, J. R.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.05.13.653704

Model Organism: Arabidopsis thaliana

vegetative phase change drought adaptation genotype-by-environment interaction GWAS developmental trade‑offs

Antifungal activity and mechanism of limonene against Fusarium oxysporum, a pathogen of potato dry rot

Authors: Xia, Q., Dong, P.

Date: 2025-10-06 · Version: 1

DOI: 10.1101/2025.10.06.675995

Model Organism: Fusarium oxysporum

limonene Fusarium oxysporum potato dry rot bio‑based fungicide transcriptomic analysis

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Wild genes to the rescue: High-throughput genomics uncovers the wild source of broomrape resistance in sunflower

Authors: Sisou, D., Ziadne, H., Eizenberg-Weiss, M., Eizenberg, H., Hubner, S.

Date: 2025-09-16 · Version: 1

DOI: 10.1101/2025.09.14.676089

Model Organism: Helianthus annuus

Orobanche cumana Helianthus annuus GWAS k‑mer mapping resistance QTL

An Axiom SNP genotyping array for potato: development, evaluation and applications

Authors: Baig, N., Thelen, K., Ayenan, M. A. T., Hartje, S., Obeng-Hinneh, E., Zgadzaj, R., Renner, J., Muders, K., Truberg, B., Rosen, A., Prigge, V., Bruckmueller, J., Luebeck, J., Van Inghelandt, D., Stich, B.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.17.670748

Model Organism: Solanum tuberosum

high-density SNP array potato (Solanum tuberosum)genomic-assisted breeding GWAS polyphenol oxidase activity

Identification of a novel link connecting indole-3-acetamide with abscisic acid biosynthesis and signaling

Authors: Moya-Cuevas, J., Ortiz-Garcia, P., Gonzalez Ortega-Villizan, A., Viguera-Leza, I., Perez-Gonzalez, A., Paz-Ares, J., Alonso-Blanco, C., Vicente-Carbajosa, J., Pollmann, S.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.15.670611

Model Organism: Arabidopsis thaliana

indole-3-acetamide (IAM)abscisic acid (ABA) signaling Arabidopsis thaliana GWAS hormone crosstalk

Spatiotemporal Dynamics of Anionic Phospholipids Orchestrate Lateral Root Initiation and Morphogenesis in Arabidopsis thaliana

Authors: Dubrovsky, J. G., Li, J., Bouziri, S., Bormann, E., Geiger, C., Reyes-Hernandez, J., Maizel, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.08.669267

Model Organism: Arabidopsis thaliana

lateral root development phosphoinositide signaling PI(4,5)P2 phosphatidylserine membrane lipid dynamics

Whole genome sequencing-based multi-locus association mapping for kernel iron, zinc and protein content in groundnut

Authors: Sagar, U. N., Parmar, S., Gangurde, S. S., Sharma, V., Pandey, A. K., Mohinuddin, D. K., Dube, N., Bhat, R. S., John, K., Sreevalli, M. D., Rani, P. S., Singh, K., Varshney, R. K., Pandey, M. K.

Date: 2025-08-05 · Version: 1

DOI: 10.1101/2025.08.04.668427

Model Organism: Arachis hypogaea

groundnut nutritional quality GWAS SNP markers KASP

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