Keywords: decoding modules, SNP array, ELF4 function, ascorbate, comparative transcriptomics, QTL mapping

Latest 25 Papers

Network analysis of flowering time genes suggests regulatory changes among SOC1 orthologues in response to cold in Brassica napus

Authors: Sidhu, G. S., Burrows, S., Woolfenden, H., Wells, R., Morris, R. J.

Date: 2026-01-20 · Version: 2

DOI: 10.64898/2025.12.16.694548

flowering time gene regulatory network comparative transcriptomics Brassica napus subfunctionalisation

The genetic architecture of leaf vein density traits and its importance for photosynthesis in maize

Authors: Coyac-Rodriguez, J. L., Perez-Limon, S., Hernandez-Jaimes, E., Hernandez-Coronado, M., Camo-Escobar, D., Alonso-Nieves, A. L., Ortega-Estrada, M. d. J., Gomez-Capetillo, N., Sawers, R. J., Ortiz-Ramirez, C. H.

Date: 2026-01-15 · Version: 1

DOI: 10.64898/2026.01.14.699362

Model Organism: Zea mays

leaf venation density C4 photosynthesis Zea mays QTL mapping MAGIC population

QTL for Heat-Induced Stomatal Anatomy Underpin Gas Exchange Variation in Field-Grown Wheat

Authors: Chaplin, E. D., Tanaka, E., Merchant, A., Sznajder, B., Trethowan, R., Salter, W. T.

Date: 2025-12-17 · Version: 1

DOI: 10.64898/2025.12.16.694723

Model Organism: Triticum aestivum

stomatal conductance heat stress wheat (Triticum aestivum)QTL mapping stomatal anatomy

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

Arabidopsis EARLY FLOWERING 4 recruits EARLY FLOWERING 3 to the nucleus to facilitate gene repression

Authors: Ronald, J., Davis, S. J.

Date: 2025-12-12 · Version: 1

DOI: 10.64898/2025.12.12.688453

Model Organism: Arabidopsis thaliana

Evening Complex ELF3 nuclear recruitment ELF4 function hypocotyl elongation Arabidopsis thaliana

Antirrhinum flower shape: unravelling gene expression across developmental axes and boundaries

Authors: Cunha, A. M., Raimundo, J., Verweij, A., Bradley, D., Coen, E., Costa, M. M. R.

Date: 2025-11-11 · Version: 1

DOI: 10.1101/2025.11.10.687484

Model Organism: Antirrhinum majus

Antirrhinum majus dorsoventral axis patterning comparative transcriptomics AmCYC/AmDIV transcription factors NGATHA‑LIKE1‑miR164 regulatory module

Characterization of a dominant SmNac-like gene as a candidate for photosensitivity in the fruit peel of eggplant

Authors: Gomis-Cebolla, J., Manrique, S., Arrones, A., Toledo-Tolgar, M. D., Luna, J., Baraja-Fonseca, V., Sanchez-Pascual, J., Gimeno-Paez, E., Plazas, M., Gramazio, P., Vilanova, S., Prohens, J.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.09.19.677371

Model Organism: Solanum melongena

anthocyanin photosensitivity eggplant NAC transcription factor QTL mapping

Symbiotic diversification relies on an ancestral gene network in plants

Authors: Castanedo, L., Melkonian, K., Vernie, T., Chauderon, L., Pellen, T., Bianconi, M., Lefort, C., Libourel, C., Le Ru, A., Aziz, S., Latorre, C., Thiercelin, O., Rodde, N., Cauet, S., Callot, C., Forrest, L., Nishiyama, T., Wickell, D., Li, F.-W., Keller, J., Delaux, P.-M.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.04.01.646537

Model Organism: Marchantia paleacea

ericoid mycorrhizae intracellular symbiosis ancestral gene module liverwort comparative transcriptomics

Novel substrate affinity of FaCCR1 and FaCCR1/FaOCT4 expression control the content of medium-chain esters in strawberry fruit

Authors: Roldan-Guerra, F. J., Amorim-Silva, V., Jimenez, J., Mari-Albert, A., Torreblanca, R., Ruiz del Rio, J., Botella, M. A., Granell, A., Sanchez-Sevilla, J. F., Castillejo, C., Amaya, I.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679181

Model Organism: Fragaria × ananassa

volatile organic compounds medium-chain esters QTL mapping FaCCR1 FaOCT4

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

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