Keywords: decoding modules, SNP array, ELF4 function, transcriptome, Solanum lycopersicum

Latest 18 Papers

Decoding stage-specific symbiotic programs in the Rhizophagus irregularis-tomato interaction using single-nucleus transcriptomics

Authors: Stuer, N., Leroy, T., Eekhout, T., De Keyser, A., Staut, J., De Rybel, B., Vandepoele, K., Van Damme, P., Van Dingenen, J., Goormachtig, S.

Date: 2026-01-23 · Version: 1

DOI: 10.64898/2026.01.22.701092

Model Organism: Solanum lycopersicum

arbuscular mycorrhizal symbiosis single-nucleus RNA sequencing Solanum lycopersicum transcription factor network inference root cortical development

A Savory-based Formulation for Sustainable Management of Early Blight caused by Alternaria solani and Preservation of Tomato Fruit Quality

Authors: Lak, F., Omrani, A., Nikkhah, M. J., Gohari, A. M., Nicolaisen, M., Abuali, M., Ahmadzadeh, M.

Date: 2026-01-22 · Version: 1

DOI: 10.64898/2026.01.20.700539

Model Organism: Solanum lycopersicum

early blight Solanum lycopersicum savory essential oil biocompatible formulation fruit quality

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

Arabidopsis EARLY FLOWERING 4 recruits EARLY FLOWERING 3 to the nucleus to facilitate gene repression

Authors: Ronald, J., Davis, S. J.

Date: 2025-12-12 · Version: 1

DOI: 10.64898/2025.12.12.688453

Model Organism: Arabidopsis thaliana

Evening Complex ELF3 nuclear recruitment ELF4 function hypocotyl elongation Arabidopsis thaliana

Micro-C in Solanum Uncovers Conserved Genome Folding and Epigenetically Defined Loops with Bifunctional Enhancer-Silencer Activity

Authors: Filler-Hayut, S., Hansen, A. S.

Date: 2025-10-16 · Version: 1

DOI: 10.1101/2025.10.16.682740

Model Organism: Solanum lycopersicum

chromatin loops Micro-C Solanum lycopersicum Polycomb repression gene regulation

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Systematic analysis of lectin gene family reveals dynamic modes of paralogue evolution and immune regulatory functions in tomato

Authors: Shukla, V., George, A. P., Marthi, R. S. V., Sonawane, A. P., Parida, S., Ramireddy, E.

Date: 2025-08-01 · Version: 1

DOI: 10.1101/2025.07.29.667230

Model Organism: Solanum lycopersicum

Lectin gene family Solanum lycopersicum Genome duplication Virus-induced gene silencing Pathogen defense

Copper Stress Trigger Organelles Communication and Chromatin Condensation Leading to Cell Death in Solanum lycopersicum

Authors: Chouhan, S., Chandra, S., Salam, A., Nandi, C. K.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.17.665307

Model Organism: Solanum lycopersicum

copper toxicity chromatin remodeling mitochondrial stress Solanum lycopersicum root apex

A Hierarchical Cascade of Organellar Silencing and their Regeneration under Anaesthetic Stress in Plants

Authors: Chandra, S., Chouhan, S., Mukherjee, B., Salam, A., Behera, L., Nandi, C. K.

Date: 2025-07-06 · Version: 1

DOI: 10.1101/2025.07.03.663012

Model Organism: Solanum lycopersicum

anaesthetic‑induced organelle damage mitochondrial and lysosomal function nuclear integrity plant cell recovery Solanum lycopersicum

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

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