Keywords: decoding modules, SNP array, FaOCT4, GWAS, root system architecture

Latest 30 Papers

A drought stress-induced MYB transcription factor regulates pavement cell shape in leaves of European aspen (Populus tremula)

Authors: Liu, S., Doyle, S. M., Robinson, K. M., Rahneshan, Z., Street, N. R., Robert, S.

Date: 2026-01-16 · Version: 1

DOI: 10.64898/2026.01.16.699252

Model Organism: Populus tremula

leaf pavement cells Populus tremula MYB305a GWAS drought stress

Wheat diversity reveals new genomic loci and candidate genes for vegetation indices using genome-wide association analysis

Authors: Rustamova, S., Jahangirov, A., Leon, J., Naz, A. A., Huseynova, I.

Date: 2026-01-14 · Version: 1

DOI: 10.64898/2026.01.14.699455

Model Organism: Triticum aestivum

Triticum aestivum drought stress spectral vegetation indices GWAS QTL hotspot

Four Decades of Breeding and Increasing Plant Density Management Reshaped Maize Root System Architecture

Authors: Thies, A., Sciarresi, C., Trifunovic, S., Eudy, D., Vyn, T. J., Archontoulis, S., Topp, C. N.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.10.693575

Model Organism: Zea mays

root system architecture maize breeding planting density X‑ray tomography soil volume overlap

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

GWAs reveals SUBER GENE1-mediated suberization via Type One Phosphatases

Authors: Han, J.-P., Lefebvre-Legendre, L., Yu, J., Capitao, M. B., Beaulieu, C., Gully, K., Shukla, V., Wu, Y., Boland, A., Nawrath, C., Barberon, M.

Date: 2025-12-12 · Version: 2

DOI: 10.1101/2025.05.06.652434

Model Organism: Arabidopsis thaliana

suberin deposition Arabidopsis thaliana GWAS SBG1 TOPP phosphatases

Systemic and local regulation of root growth by vascular trehalose 6-phosphate is correlated with re-allocation of primary metabolites between shoots and roots

Authors: Goebel, M., Foster, J., Westhoff, P., Skorzinski, N., Lepper, H., Njo, M. F., Schmid, M., Beeckman, T., Tanurdzic, M., Amtmann, A., Fichtner, F.

Date: 2025-11-13 · Version: 1

DOI: 10.1101/2025.11.13.688188

Model Organism: Arabidopsis thaliana

Trehalose-6-phosphate signaling vascular-derived metabolites root system architecture carbon‑nitrogen balance reciprocal grafting

Integrating image-based phenotyping and GWAS to map tolerance to Spittlebug nymphs in interspecific Urochloa grasses

Authors: Espitia-Buitrago, P., Perea, C., Mejia-Medina, J. C., Hernandez, L. M., Castiblanco, V., Ryan, C., De Vega, J. J., Jauregui, R. N.

Date: 2025-11-05 · Version: 1

DOI: 10.1101/2025.11.03.686394

Model Organism: Urochloa spp.

Urochloa spittlebug tolerance GWAS QTL image-based phenotyping

Development alters genotype-environment interactions and shapes adaptation in Arabidopsis

Authors: Lawrence-Paul, E. H., Janakiraman, J., Lawrence-Paul, M. R., Ben-Zeev, R., Xu, Y., Penn, A., Lasky, J. R.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.05.13.653704

Model Organism: Arabidopsis thaliana

vegetative phase change drought adaptation genotype-by-environment interaction GWAS developmental trade‑offs

Novel substrate affinity of FaCCR1 and FaCCR1/FaOCT4 expression control the content of medium-chain esters in strawberry fruit

Authors: Roldan-Guerra, F. J., Amorim-Silva, V., Jimenez, J., Mari-Albert, A., Torreblanca, R., Ruiz del Rio, J., Botella, M. A., Granell, A., Sanchez-Sevilla, J. F., Castillejo, C., Amaya, I.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679181

Model Organism: Fragaria × ananassa

volatile organic compounds medium-chain esters QTL mapping FaCCR1 FaOCT4

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

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