Keywords: decoding modules, SNP array, QTL mapping, transcriptomic analysis, transcriptomics, ethylene signaling

Latest 69 Papers

Manipulation of in planta ethylene levels modulates the metabolome of Populus tremula x tremuloides in a microbial-dependent manner.

Authors: Fracchia, F., Guinet, F., Warion, S., Bednareck, M., Chervin, C., Engle, N. L., Tschaplinski, T. J., Veneault-Fourrey, C., Deveau, A.

Date: 2025-03-17 · Version: 1

DOI: 10.1101/2025.03.17.643694

Model Organism: Populus tremula × Populus tremuloides

ethylene signaling poplar microbiota fungal and bacterial community assembly metabolomics root exudates

The hollow truth: ethylene-triggered ROS, PCD, senescence, and autophagy drive hollow stem formation

Authors: Yan, M., Fan, W., Yang, W., Zhao, J., Meng, Y., Zhou, W., Zhuang, H., Xu, Z., Wang, Y., Huang, Q., Yuan, L., Wang, H., Yang, J.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.06.641815

Model Organism: Ipomoea aquatica

hollow stem programmed cell death ethylene signaling reactive oxygen species NAC transcription factors

The genome of the vining fern Lygodium microphyllum highlights genomic and functional differences between life phases of an invasive plant

Authors: Pelosi, J., Davenport, R., Kuo, L.-Y., Gray, L. N., Dant, A. J., Kim, E. H., Li, F.-W., Dlugosch, K. M., Krabbenhoft, T. J., Barbazuk, W. B., Sessa, E. B.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.06.640867

Model Organism: Lygodium microphyllum

Lygodium microphyllum alternation of generations transcriptomics methylome invasive species

Ethylene modulates cell wall mechanics for root responses to compaction

Authors: Zhang, J., Qu, Z., Liu, Z., Li, J., Farrar, E., Chara, O., Ogorek, L. P., Borges, A., Sakamoto, S., Mitsuda, N., Zhu, X., Zhu, M., Shi, J., Liang, W., Bennett, M., Pandey, B., Zhang, D., Persson, S.

Date: 2025-03-03 · Version: 1

DOI: 10.1101/2025.03.02.640043

Model Organism: Arabidopsis thaliana

soil compaction ethylene signaling Auxin Response Factor1 cellulose synthase repression root radial expansion

Future flooding tolerant rice germplasm: resilience afforded beyond Sub1A gene

Authors: Anumalla, M., Khanna, A., Catolos, M., Ramos, J., Sta. Cruz, M. T., Venkateshwarlu, C., Konijerla, J., Pradhan, S. K., Dash, S. K., Das, Y., Chowdhury, D., Chetia, S. K., Das, J., Nath, P., Merugumala, G. R., Roy, B., Pradhan, N., Jana, M., Dana, I., Debnath, S., Nath, A., Prasad Singh, S., Iftekharuddaula, K. M., Ghosal, S., Ali, M., Khanam, S., Ul Islam, M. M., Faruquee, M., Tonny, H. J., Hasan, M. R., Rahman, A., Ali, J., Sinha, P., Singh, V., Rafiqul Islam, M., Bhosale, S., Kohli, A., Bhardwaj, H. R., Hussain, W.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.24.639789

Model Organism: Oryza sativa

flood tolerance rice (Oryza sativa)QTL mapping genomic selection Transition from Trait to Environment (TTE) breeding

Identification of QTLs linked to partial resistance to foot and root rot caused by Fusarium avenaceum and Fusarium oxysporum in faba bean (Vicia faba)

Authors: Webb, A., Thomas, J. E., Davis, H., McAdam, S., Angra, D., O'Sullivan, D. M., Gostkiewicz, K., Capozzi, M., Wood, T. A.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.21.639454

Model Organism: Vicia faba

Vicia faba Fusarium foot and root rot QTL mapping SNP array disease resistance

Transcriptomic insights into the role of miR394 in the regulation of flowering time in Arabidopsis thaliana

Authors: Belen, F., Bernardi, Y., Reutemann, A., Vegetti, A., Dotto, M. C.

Date: 2025-02-20 · Version: 1

DOI: 10.1101/2025.02.15.638417

Model Organism: Arabidopsis thaliana

miR394 flowering time Arabidopsis thaliana transcriptomics lncRNA

POLARIS is a copper-binding peptide required for ethylene signalling control in Arabidopsis.

Authors: Mudge, A. M., Mehdi, S., Michaels, W. E., Oroza-Puente, B., Shen, W., Tomlinson, C., Wei, W., Hoppen, C., Uzun, B., Roy, D., Hetherington, F. M., Topping, J. F., Sadanandom, A., Groth, G., Robinson, N. J., Lindsey, K.

Date: 2025-02-04 · Version: 6

DOI: 10.1101/2023.06.15.545071

Model Organism: Arabidopsis thaliana

ethylene signaling copper binding POLARIS peptide ETR1 receptor Arabidopsis thaliana

A maize near-isogenic line population designed for gene discovery and characterization of allelic effects

Authors: Zhong, T., Mullens, A., Morales, L., Swarts, K., Stafstrom, W., He, Y., Sermons, S., Yang, Q., Lopez-Zuniga, L. O., Rucker, E., Thomason, W., Nelson, R., Jamann, T. M., Balint-Kurti, P., Holland, J. B.

Date: 2025-02-02 · Version: 1

DOI: 10.1101/2025.01.29.635337

Model Organism: Zea mays

Zea mays near‑isogenic lines genotyping‑by‑sequencing hidden Markov model QTL mapping

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