Keywords: decoding modules, SNP array, ascorbate, SWI3, GWAS, bacterial diversity

Latest 25 Papers

Variations in the root-soil system influence the grapevine holobiont by shaping plant physiology and root microbiome

Authors: Guazzini, M., Marasco, R., Radovic, S., Pellegrini, E., Vuerich, M., Lodovici, A., De Wittenau, G. D., Paparelli, E., Magris, G., Zanin, L., Contin, M., De Luca, E., Daffonchio, D., Di Gaspero, G., Marroni, F.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.14.670050

Model Organism: Vitis vinifera

soil microbiome grapevine holobiont multi‑omics bacterial diversity leaf nutrient status

An Axiom SNP genotyping array for potato: development, evaluation and applications

Authors: Baig, N., Thelen, K., Ayenan, M. A. T., Hartje, S., Obeng-Hinneh, E., Zgadzaj, R., Renner, J., Muders, K., Truberg, B., Rosen, A., Prigge, V., Bruckmueller, J., Luebeck, J., Van Inghelandt, D., Stich, B.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.17.670748

Model Organism: Solanum tuberosum

high-density SNP array potato (Solanum tuberosum)genomic-assisted breeding GWAS polyphenol oxidase activity

Identification of a novel link connecting indole-3-acetamide with abscisic acid biosynthesis and signaling

Authors: Moya-Cuevas, J., Ortiz-Garcia, P., Gonzalez Ortega-Villizan, A., Viguera-Leza, I., Perez-Gonzalez, A., Paz-Ares, J., Alonso-Blanco, C., Vicente-Carbajosa, J., Pollmann, S.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.15.670611

Model Organism: Arabidopsis thaliana

indole-3-acetamide (IAM)abscisic acid (ABA) signaling Arabidopsis thaliana GWAS hormone crosstalk

Whole genome sequencing-based multi-locus association mapping for kernel iron, zinc and protein content in groundnut

Authors: Sagar, U. N., Parmar, S., Gangurde, S. S., Sharma, V., Pandey, A. K., Mohinuddin, D. K., Dube, N., Bhat, R. S., John, K., Sreevalli, M. D., Rani, P. S., Singh, K., Varshney, R. K., Pandey, M. K.

Date: 2025-08-05 · Version: 1

DOI: 10.1101/2025.08.04.668427

Model Organism: Arachis hypogaea

groundnut nutritional quality GWAS SNP markers KASP

Integrative genomic and transcriptomic analyses uncover regulatory landscape of symbiotic nitrogen fixation in soybean natural population

Authors: Li, Y., Feng, w., Feng, X., Liu, X., Hao, S., Lian, L., Gao, L., Shao, Y., Chen, H., Chen, Z., Yuan, J., Qin, L., Li, X., Li, X., Wang, X.

Date: 2025-07-23 · Version: 1

DOI: 10.1101/2025.07.18.665310

Model Organism: Glycine max

symbiotic nitrogen fixation GWAS TWAS eQTL mapping ATAC-seq

Exploring phenotypic and genetic variation in Lactuca with GWAS in L. sativa and L. serriola

Authors: Mehrem, S. L., Van den Ackerveken, G., Snoek, B. L.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.27.661939

Model Organism: Multi-species

Lactuca wild relatives anthocyanin accumulation leaf morphology pathogen resistance GWAS

Spatial Coordination between Leaf Gradient and Temperature Response in Barley

Authors: Fernandez, E. C., Tu, G., Dai, W., Yang, S., Liu, Z., Grzybowski, M., Liang, Z.

Date: 2025-06-27 · Version: 1

DOI: 10.1101/2025.06.24.661333

Model Organism: Hordeum vulgare

Barley (Hordeum vulgare)heat stress chlorophyll fluorescence imaging NPQ kinetics GWAS

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Spatial heterogeneity of disease infection attributable to neighbor genotypic identity in barley cultivars

Authors: Akram, I., Rohr, L., Shimizu, K. K., Shimizu-Inatsugi, R., Sato, Y.

Date: 2025-04-24 · Version: 1

DOI: 10.1101/2025.04.22.650038

Model Organism: Hordeum vulgare

spatial heterogeneity neighbor genotype effect barley disease resistance GWAS SpATS

High throughput screen of NPQ in sorghum shows highly polygenic architecture of photoprotection

Authors: Vath, R. L., Fernandes, S., Monier, B., Glowacka, K., Walter, J., Lipka, A. E., Ferguson, J. N., Bernacchi, C., Pederson, T., Kromdijk, J.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.18.649521

Model Organism: Sorghum bicolor

photoprotection non-photochemical quenching Sorghum bicolor GWAS TWAS

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