Keywords: decoding modules, SNP array, ascorbate, leaf development, plasmodesmata, transcriptomics, salicylic acid

Latest 57 Papers

Comparative multi-omics profiling of Gossypium hirsutum and Gossypium barbadense fibers at high temporal resolution reveals key differences in polysaccharide composition and associated glycosyltransferases

Authors: Swaminathan, S., Lee, Y., Grover, C. E., DeTemple, M. F., Mugisha, A. S., Sichterman, L. E., Yang, P., Xie, J., Wendel, J. F., Szymanski, D. B., Zabotina, O. A.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.26.650795

Model Organism: Multi-species

cotton fiber development polysaccharide composition glycome profiling transcriptomics glycosyltransferases

Stepwise increase in plasmodesmata during C4 evolution in Flaveria

Authors: Aleksejeva, K., Schreier, T. B.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.18.649591

Model Organism: Flaveria spp.

plasmodesmata C4 photosynthesis Flaveria mesophyll-bundle sheath interface evolutionary gradient

ERF transcription factor regulons underpin growth-defence trade-off under acute heat stress in rice seedlings

Authors: Nair, A. U., Vishwakarma, S., Guha, T., Kadumuri, R. V., Fritschi, F. B., Chavali, S., Allu, A. D.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.21.649784

Model Organism: Oryza sativa

heat stress Oryza sativa seedling transcriptomics ethylene responsive factors phytohormone treatment

Mobile immune signals potentiate salicylic acid-mediated plant immunity via WRKY38/62 transcription factors

Authors: Mason, R. O., Grey, H., Spoel, S. H.

Date: 2025-04-18 · Version: 1

DOI: 10.1101/2025.04.17.649115

Model Organism: Arabidopsis thaliana

systemic acquired resistance salicylic acid N‑hydroxy‑pipecolic acid WRKY transcription factors NPR1 stability

A transcriptional dissection of the petty spurge (Euphorbia peplus L.) reproductive structure

Authors: Johnson, A. R., Bao, A., Frank, M. H.

Date: 2025-04-17 · Version: 2

DOI: 10.1101/2024.05.06.592779

Model Organism: Euphorbia peplus

cyathium transcriptomics floral development genes SEP1 paralogs Euphorbia peplus

Welcome pathogens: transient heat dampens the responses to acibenzolar-S-methyl beyond defenses in apple plants

Authors: Chavonet, E., Nguyen, B.-h., Heintz, C., Cournol, R., Siroka, J., Novak, O., Larbat, R., Gaucher, M., Brisset, M.-N., Pantin, F., Degrave, A.

Date: 2025-04-06 · Version: 1

DOI: 10.1101/2025.04.03.647103

Model Organism: Malus domestica

heat stress acibenzolar‑S‑methyl (ASM)induced immunity apple (Malus domestica)transcriptomics

Omics-driven Identification of Candidate Genes and SNP markers in a Major QTL Controlling Early Heading in Rice

Authors: Rao, D., T, N. S., CG, G., Gaur, N., Jamaloddin, M., Maganti, S. M., Raman, M. S., Patel, H. K., Tiwari, S., Sonti, R. V.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.25.645207

Model Organism: Oryza sativa

heading date rice (Oryza sativa)QTL-seq SNP markers transcriptomics

Multilevel analysis of response to plant growth promoting and pathogenic bacteria in Arabidopsis roots and the role of CYP71A27 in this response

Authors: Koprivova, A., Ristova, D., Berka, M., Berkova, V., Türksoy, G. M., Andersen, T. G., Westhoff, P., Cerny, M., Kopriva, S.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.26.645393

Model Organism: Arabidopsis thaliana

CYP71A27 plant‑microbe interaction Pseudomonas fluorescens CH267 Burkholderia glumeae PG1 transcriptomics

Loss of tomato geranylgeranyl diphosphate synthase 2 increases monoterpenoid levels and enhances immune responses to bacterial infection

Authors: Perez-Perez, J., Ezquerro, M., Lim, S., Ha, S.-H. S. H., Lopez-Gresa, M. P., Rodriguez-Concepcion, M., Lison, P.

Date: 2025-03-26 · Version: 1

DOI: 10.1101/2025.03.24.644926

Model Organism: Solanum lycopersicum

GGPP synthase SlG2 monoterpenes salicylic acid Pseudomonas syringae infection

Emergence of isochorismate-based salicylic acid biosynthesis within Brassicales

Authors: Hong, K., Tang, Y., Jeanguenin, L., Kang, W., Wang, Y., Zuo, L., Li, P., He, J., Jiang, W., Huang, R., Matsui, H., Wang, Y., Nakagami, H., Li, B., Li, X., Xie, K., Fukushima, K., Guo, L., Han, X., Katagiri, F., Hattori, M., Tsuda, K.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.03.641121

Model Organism: Arabidopsis thaliana

salicylic acid isochorismate pathway Brassicales evolution EDS5 transporter PBS3 enzyme

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