Keywords: decoding modules, SNP array, comparative transcriptomics, wheat, metabarcoding, genetic diversity

Latest 38 Papers

Population genomic structure of sorghum landraces across landscape, environment and culture

Authors: Vasquez Cerda, E. E., Bellis, E. S., Das, A., Slayton, E. R., Morris, G. P., Lasky, J. R.

Date: 2025-11-04 · Version: 1

DOI: 10.1101/2025.11.02.686151

Sorghum bicolor population genomics human travel time linguistic structure genetic diversity

Symbiotic diversification relies on an ancestral gene network in plants

Authors: Castanedo, L., Melkonian, K., Vernie, T., Chauderon, L., Pellen, T., Bianconi, M., Lefort, C., Libourel, C., Le Ru, A., Aziz, S., Latorre, C., Thiercelin, O., Rodde, N., Cauet, S., Callot, C., Forrest, L., Nishiyama, T., Wickell, D., Li, F.-W., Keller, J., Delaux, P.-M.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.04.01.646537

Model Organism: Marchantia paleacea

ericoid mycorrhizae intracellular symbiosis ancestral gene module liverwort comparative transcriptomics

Dual recognition of structurally unrelated mildew effectors underlies the broad-spectrum resistance of Pm3e in wheat

Authors: Kunz, L., Bernasconi, Z., Heuberger, M., Isaksson, J., Sotiropoulos, A. G., Stirnemann, U., Jigisha, J., Menardo, F., Wicker, T., Mueller, M. C., Keller, B.

Date: 2025-10-30 · Version: 2

DOI: 10.1101/2025.10.26.683672

Model Organism: Triticum aestivum (wheat)

broad-spectrum resistance NLR receptors Pm3 alleles powdery mildew effectors wheat

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

Regenerative agriculture effects on biomass, drought resilience and 14C-photosynthate allocation in wheat drilled into ley compared to disc or ploughed arable soil

Authors: Austen, N., Short, E., Tille, S., Johnson, I., Summers, R., Cameron, D. D., Leake, J. R.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.04.674292

Model Organism: Triticum aestivum

regenerative agriculture soil macroaggregation wheat 14C pulse labeling drought resilience

Population structure and diversity of common bean (Phaseolus vulgaris L.) landraces in the Peruvian Amazon

Authors: Tobaru, J., Barrera-Lozano, M., Vecco-Giove, C. D., Pelaez, J., Pinchi, M., Vargas, Y., Chuquillanqui, J., Soto-Torres, J., Robles, R., Saravia, D., Petroli, C., Etchevers, J. D., Ortiz, R., Blas, R.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.04.674357

Model Organism: Phaseolus vulgaris

Phaseolus vulgaris Amazonian landraces genetic diversity DArTseq SNP genotyping breeding resources

Soil phosphate availability modulates the arbuscular mycorrhizal fungal community and mycorrhizal nutrition in wheat

Authors: Trinquier, M., Lecloux, E., Bruno, P., Gasciolli, V., Jouany, C., Roux, C., Lefebvre, B., Ardanuy, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.08.669323

Model Organism: Triticum aestivum

arbuscular mycorrhizal fungi phosphorus availability nitrogen availability wheat metabarcoding

An aphid resistant wheat variety reduces the transmission of Barley Yellow Dwarf Virus (BYDV) by Rhopalosiphum padi (L.)

Authors: Qonaah, I. A., Simon, A. L., Warner, D., Bruce, T. J. A., Ray, R. V.

Date: 2025-08-02 · Version: 1

DOI: 10.1101/2025.07.30.667415

Model Organism: Triticum aestivum

aphid resistance Barley Yellow Dwarf Virus wheat 2‑tridecanone virus transmission

Homoeolog expression in polyploid wheat mutants shows limited transcriptional compensation

Authors: Dorussen, D., Knight, E., Simmonds, J., Borrill, P.

Date: 2025-07-02 · Version: 1

DOI: 10.1101/2025.07.01.662569

Model Organism: Triticum aestivum

transcriptional compensation homoeologs premature termination codon wheat mutagenised lines

Associations of genetic and spectral diversity in European beech

Authors: Czyz, E. A., Schmid, B., Eppinga, M. B., de La Harpe, M., Moradi, A., Li, C., Coq--Etchegaray, D., Schaepman, M. E., Schuman, M. C.

Date: 2025-06-24 · Version: 3

DOI: 10.1101/2023.08.16.553487

Model Organism: Fagus sylvatica

Fagus sylvatica genetic diversity spectral phenotyping leaf reflectance SNP association

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