Keywords: decoding modules, SNP array, root exudates, root development, genetic diversity

Latest 23 Papers

Population structure and diversity of common bean (Phaseolus vulgaris L.) landraces in the Peruvian Amazon

Authors: Tobaru, J., Barrera-Lozano, M., Vecco-Giove, C. D., Pelaez, J., Pinchi, M., Vargas, Y., Chuquillanqui, J., Soto-Torres, J., Robles, R., Saravia, D., Petroli, C., Etchevers, J. D., Ortiz, R., Blas, R.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.04.674357

Model Organism: Phaseolus vulgaris

Phaseolus vulgaris Amazonian landraces genetic diversity DArTseq SNP genotyping breeding resources

Legacy of warming and microbial treatments shape root exudates and rhizosphere fungal communities of a tropical tree

Authors: Masanga, J., Bartz, P., Villani, G. H., Grullon-Penkova, I. F., Wood, T. E., Bachelot, B., Lasky, J. R.

Date: 2025-08-13 · Version: 1

DOI: 10.1101/2025.08.11.669667

Model Organism: Guarea guidonia

ecometabolomics root exudates fungal community profiling Guarea guidonia soil moisture

Associations of genetic and spectral diversity in European beech

Authors: Czyz, E. A., Schmid, B., Eppinga, M. B., de La Harpe, M., Moradi, A., Li, C., Coq--Etchegaray, D., Schaepman, M. E., Schuman, M. C.

Date: 2025-06-24 · Version: 3

DOI: 10.1101/2023.08.16.553487

Model Organism: Fagus sylvatica

Fagus sylvatica genetic diversity spectral phenotyping leaf reflectance SNP association

Ethylene Receptor Gain- and Loss-of-function Mutants Reveal an ETR1-dependent Transcriptional Network in Roots

Authors: White, M. G., Harkey, A., Muhlemann, J. K., Olex, A. L., Pfeffer, N. J., Houben, M., Binder, B., Muday, G. K.

Date: 2025-06-22 · Version: 3

DOI: 10.1101/2024.06.26.600793

Model Organism: Arabidopsis thaliana

ethylene signaling ETR1 root development gene regulatory network Arabidopsis

Contrasting patterns of local adaptation and climate resilience across forest management regimes in Norway spruce (Picea abies): implications for reforestation practices under climate change

Authors: Eklöf, H., Bernhardsson, C., Ingvarsson, P. K.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.11.659044

Model Organism: Picea abies

genetic diversity local adaptation Picea abies forest management climate change

Island-wide population genomic analysis of the coastal shrub, beach naupaka (Scaevola taccada L.), on Oahu

Authors: McAssey, E. V., Downs, C., Heyduk, K.

Date: 2025-05-28 · Version: 1

DOI: 10.1101/2025.05.25.655311

Model Organism: Scaevola taccada

Scaevola taccada population genomics ddRAD-seq haplotype network genetic diversity

Biocultural vulnerability of traditional crops in the Indian Trans Himalaya

Authors: Jaggi, H., Anand, A., Solari, K. A., Echeverri, A., Tobge, R., Tsewang, T., Suryawanshi, K., Tuljapurkar, S. D.

Date: 2025-05-10 · Version: 2

DOI: 10.1101/2024.10.22.619747

Model Organism: Multi-species

genetic diversity traditional crops Himalayan agriculture whole-genome sequencing nutritional profiling

Root exudation facilitate water infiltration and rewetting of dry soil

Authors: Gomez, E., Mair, A., Martin, I., de las Heras, G., Ptashnyk, M., Dupuy, L. X.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.26.645447

Model Organism: General

root exudates water infiltration dry soil root architecture drought resistance

Chemical Inhibition of Splicing-Related Protein Kinases Reveals Phosphorylation-Driven Regulation of RNA Alternative Splicing in Arabidopsis Seedlings

Authors: Rodriguez Gallo, M. C., Murray, C., Kennedy, C., Talasila, M., Bhatt, D., Steyer, J., Glover, M., Uhrig, R. G.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.24.644839

Model Organism: Arabidopsis thaliana

SR protein kinases alternative splicing root development chemical inhibition phosphoproteomics

Manipulation of in planta ethylene levels modulates the metabolome of Populus tremula x tremuloides in a microbial-dependent manner.

Authors: Fracchia, F., Guinet, F., Warion, S., Bednareck, M., Chervin, C., Engle, N. L., Tschaplinski, T. J., Veneault-Fourrey, C., Deveau, A.

Date: 2025-03-17 · Version: 1

DOI: 10.1101/2025.03.17.643694

Model Organism: Populus tremula × Populus tremuloides

ethylene signaling poplar microbiota fungal and bacterial community assembly metabolomics root exudates

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