Keywords: decoding modules, codon usage, transcriptome profiling, Zea mays

Latest 34 Papers

Genetic determinants of aerial root traits that support biological nitrogen fixation in maize

Authors: Laspisa, D., Venado, R. E., Diogo, R., Ane, J.-M., Wallace, J. G.

Date: 2025-06-02 · Version: 1

DOI: 10.1101/2025.05.30.657053

Model Organism: Zea mays

biological nitrogen fixation aerial roots Zea mays QTL mapping heritability

Dynamic changes to the plastoglobule lipidome and proteome in water-deficient maize

Authors: Devadasu, E., Schilmiller, A. L., Gonzalez, N., Lundquist, P. K.

Date: 2025-05-30 · Version: 1

DOI: 10.1101/2025.05.26.656201

Model Organism: Zea mays

drought resilience plastoglobules lipidomics quantitative proteomics Zea mays

Characterization of the maize (Zea mays)-Ustilago maydis interaction in a warming climate

Authors: Schwarz, C. G., Hartmann, F., Zier, C., van der Linde, K.

Date: 2025-05-29 · Version: 1

DOI: 10.1101/2025.05.26.656155

Model Organism: Zea mays

Zea mays Ustilago maydis temperature stress RNA-seq GSL4

Diploid gametes in maize by mutation of A-Type cyclins: a step towards apomeiosis and synthetic apomixis.

Authors: Skinner, D. J., Gaikwad, A. H., Fenner, J. A., Green, J., Cho, M.-J., Kelliher, T., Sundaresan, V.

Date: 2025-05-19 · Version: 1

DOI: 10.1101/2025.05.16.654085

Model Organism: Zea mays

synthetic apomixis diploid gametes Zea mays A-type cyclin tetraploid progeny

Metabolite profiling reveals slow and uncoordinated adjustment of C4 photosynthesis to sudden changes in irradiance

Authors: Arrivault, S., Medeiros, D. B., Sales, C. R. G., Guenther, M., Kromdijk, J., Fernie, A. R., Stitt, M.

Date: 2025-04-18 · Version: 1

DOI: 10.1101/2025.04.13.648559

Model Organism: Zea mays

C4 photosynthesis irradiance fluctuations metabolic buffering intercellular shuttles Zea mays

Large-scale single-cell profiling of stem cells uncovers redundant regulators of shoot development and yield trait variation

Authors: Xu, X., Passalacqua, M., Rice, B., Demesa-Arevalo, E., Kojima, M., Takebayashi, Y., Harris, B., Sakakibara, H., Gallavotti, A., Gillis, J., Jackson, D.

Date: 2025-04-17 · Version: 2

DOI: 10.1101/2024.03.04.583414

Model Organism: Multi-species

single-cell RNA sequencing shoot stem cells Arabidopsis thaliana Zea mays stem cell regulators

Volatiles from low R:FR-treated maize plants increase the emission of herbivore-induced plant volatiles in their neighbors

Authors: Escobar Bravo, R., Schimmel, B. C. J., Erb, M.

Date: 2025-04-02 · Version: 2

DOI: 10.1101/2024.10.05.616768

Model Organism: Zea mays

low R:FR light Zea mays herbivore‑induced plant volatiles volatile priming plant‑plant communication

Revisiting the Central Dogma: the distinct roles of genome, methylation, transcription, and translation on protein expression in Arabidopsis thaliana

Authors: Zhong, Z., Bailey, M., Kim, Y.-I., Pesaran-Afsharyan, N., Parker, B., Arathoon, L., Li, X., Rundle, C. A., Behrens, A., Nedialkova, D. D., Slavov, G., Hassani-Pak, K., Lilley, K. S., Theodoulou, F. L., Mott, R.

Date: 2025-03-31 · Version: 2

DOI: 10.1101/2025.01.08.631880

Model Organism: Arabidopsis thaliana

Arabidopsis thaliana codon usage gene expression DNA methylation ribosome profiling

Functional genetics of rice <em>PISTILLATA</em> genes unravels new roles and targets in flowering time, female fertility and parthenocarpy

Authors: Zamzam, M., Basak, R., Singh, S., Prakash, S., Peesapati, R., Khanday, I., Simonini, S., Grossniklaus, U., Vijayraghavan, U.

Date: 2025-03-31 · Version: 2

DOI: 10.1101/2023.08.05.552136

Model Organism: Oryza sativa

lodicule development PI paralogs (OsMADS2/OsMADS4)flowering time regulation genome-wide binding analysis transcriptome profiling

High-resolution transcriptional atlas of growing maize shoot organs throughout plant development under well-watered and drought conditions

Authors: Zhang, J., Verbraeken, L., Sprenger, H., Mertens, S., Wuyts, N., Cannoot, B., De Block, J., Demuynck, K., Natran, A., Maleux, K., Merchie, J., Crafts-Brandner, S., Vogel, J., Bruce, W., Inze, D., Maere, S., Nelissen, H.

Date: 2025-03-13 · Version: 1

DOI: 10.1101/2025.03.12.642568

Model Organism: Zea mays

Zea mays leaf and internode development drought stress spatiotemporal transcriptome atlas gene regulatory networks

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