Keywords: decoding modules, fruit quality, root development, alternative splicing, transcriptomics, ascorbate, PIF4

Latest 60 Papers

Chemical Inhibition of Splicing-Related Protein Kinases Reveals Phosphorylation-Driven Regulation of RNA Alternative Splicing in Arabidopsis Seedlings

Authors: Rodriguez Gallo, M. C., Murray, C., Kennedy, C., Talasila, M., Bhatt, D., Steyer, J., Glover, M., Uhrig, R. G.

Date: 2025-03-27 · Version: 1

DOI: 10.1101/2025.03.24.644839

SR protein kinases alternative splicing root development chemical inhibition phosphoproteomics

Next-Generation Mapping of the ACINUS-Mediated Alternative Splicing Machinery and Its Regulation by O-glycosylation in Arabidopsis

Authors: Shrestha, R., Reyes, A. V., Carey, S., Karunadasa, S. S., Zhai, W., Byun, D., Lin, W.-D., Li, J., Alerte, K., Cui, H., Wang, Z.-Y., Xu, S.-L.

Date: 2025-03-26 · Version: 2

DOI: 10.1101/2025.01.04.631329

Model Organism: Arabidopsis thaliana

alternative splicing TurboID proximity labeling O-glycosylation Arabidopsis thaliana splicing factor ACINUS

Genome-wide analysis of phased small interfering RNAs related to tomato fruit ripening and quality

Authors: Stalder, S., Sabbione, A., Daurelio, L., Dotto, M. C.

Date: 2025-03-24 · Version: 1

DOI: 10.1101/2025.03.20.644405

Model Organism: Solanum lycopersicum

phasiRNA fruit quality Tomato ripening regulatory networks molecular breeding

A tomato line hyposensitive to simulated proximity shade shows altered auxin-related 1 gene expression and improved fruit yield under high-density field conditions

Authors: Burbano, E., Francesca, S., Palau-Rodriguez, J., Berdonces, A., Valverde-Carbajal, L., Perez-Beser, J. M., Addonizio, M., MARTINEZ GARCIA, J., Rigano, M. M., Rodriguez-Concepcion, M.

Date: 2025-03-19 · Version: 1

DOI: 10.1101/2025.03.18.643865

Model Organism: Solanum lycopersicum

far-red light supplementation shade tolerance tomato introgression line fruit quality high-density planting

WDL4 is a microtubule associated protein required for phytochrome B dependent thermomorphogenesis

Authors: Schaefer, K., Shaw, S. L.

Date: 2025-03-13 · Version: 1

DOI: 10.1101/2025.03.10.641267

Model Organism: Arabidopsis thaliana

thermomorphogenesis phytochrome B PIF4 WDL4 auxin

MYB93 regulates responses to environmental sulphur in Arabidopsis and tomato.

Authors: Cao, X., Wilkinson, H. B., Hutton, B., McMulkin, N., Graham, N. S., Etherington, R., Oliver, A. G., Clayton, C. M., Kaur, H., Coates, J. C.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.04.641362

Model Organism: Arabidopsis thaliana

sulfur nutrition AtMYB93 root development transcriptome analysis elemental analysis

The genome of the vining fern Lygodium microphyllum highlights genomic and functional differences between life phases of an invasive plant

Authors: Pelosi, J., Davenport, R., Kuo, L.-Y., Gray, L. N., Dant, A. J., Kim, E. H., Li, F.-W., Dlugosch, K. M., Krabbenhoft, T. J., Barbazuk, W. B., Sessa, E. B.

Date: 2025-03-07 · Version: 1

DOI: 10.1101/2025.03.06.640867

Model Organism: Lygodium microphyllum

Lygodium microphyllum alternation of generations transcriptomics methylome invasive species