Keywords: decoding modules, root development, SNP array, CLPC2, transcriptomics, Marchantia polymorpha, autophagy

Latest 80 Papers

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Modulation of the GT Family 47 clade B gene affects arabinan deposition in elaters of Marchantia polymorpha

Authors: Kang, H. S. F., Lampugnani, E. R., Tong, X., Prabhakar, P. K., Flores-Sandoval, E., Hansen, J., Jorgensen, B., Bowman, J. L., Urbanowicz, B. R., Ebert, B., Persson, S.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.05.02.651808

Model Organism: Marchantia polymorpha

GT47B arabinosyltransferase 1,5‑linked arabinan Marchantia polymorpha cell wall composition CoMPP

The Building Blocks of Early Land Plants: Glycosyltransferases and Cell Wall Architecture in the model liverwort Marchantia polymorpha

Authors: Kang, H. S. F., Tong, X., Mariette, A., Leong, M., Beahan, C., Flores-Sandoval, E., Pedersen, G., Rautengarten, C., Bowman, J. L., Ebert, B., Bacic, A., Doblin, M., Persson, S., Lampugnani, E. R.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.30.651426

Model Organism: Marchantia polymorpha

Marchantia polymorpha cell wall polysaccharides arabinan glycosyltransferase families comparative genomics

Comparative multi-omics profiling of Gossypium hirsutum and Gossypium barbadense fibers at high temporal resolution reveals key differences in polysaccharide composition and associated glycosyltransferases

Authors: Swaminathan, S., Lee, Y., Grover, C. E., DeTemple, M. F., Mugisha, A. S., Sichterman, L. E., Yang, P., Xie, J., Wendel, J. F., Szymanski, D. B., Zabotina, O. A.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.26.650795

Model Organism: Multi-species

cotton fiber development polysaccharide composition glycome profiling transcriptomics glycosyltransferases

The MpCAFA gene encodes a ciliary protein required for spermatozoid motility in the liverwort Marchantia polymorpha

Authors: MORITA, M., Yamato, K. T.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.26.650577

Model Organism: Marchantia polymorpha

MpCAFA ciliary motility spermatozoid Marchantia polymorpha CAPS/FAP115 domains

The cytochrome P450 enzyme MpCYP78E1 inhibits meristem initiation and activity in Marchantia polymorpha

Authors: Spencer, V., Casey, C., Mosiolek, M., Jandrasits, K., Edelbacher, N., Dolan, L.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.28.651025

Model Organism: Marchantia polymorpha

Marchantia polymorpha meristem activity MpCYP78E1 RNA‑seq branching regulation

Replicated repurposing of an ancestral transcriptional complex in land plants

Authors: Kongsted, T. E., Romani, F., Airoldi, C. A., Haseloff, J., Glover, B. J.

Date: 2025-04-28 · Version: 1

DOI: 10.1101/2025.04.25.650595

Model Organism: Marchantia polymorpha

MBW transcriptional complex MYB transcription factor Marchantia polymorpha flavonoid pathway evolution oil body maturation

ERF transcription factor regulons underpin growth-defence trade-off under acute heat stress in rice seedlings

Authors: Nair, A. U., Vishwakarma, S., Guha, T., Kadumuri, R. V., Fritschi, F. B., Chavali, S., Allu, A. D.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.21.649784

Model Organism: Oryza sativa

heat stress Oryza sativa seedling transcriptomics ethylene responsive factors phytohormone treatment

The autophagy-related genes AtATG5 and AtATG7 influence reserve mobilisation and responses to ABA during seed germination in Arabidopsis thaliana

Authors: Contreras, E., Sanchez-Vicente, I., Pastor-Mora, E., Aylon-Rodriguez, M., Gonzalez-Ceballos, M., Delgado-Gutierrez, M. A., Lorenzo, O., Vicente-Carbajosa, J., Iglesias-Fernandez, R.

Date: 2025-04-21 · Version: 2

DOI: 10.1101/2024.05.15.593177

Model Organism: Arabidopsis thaliana

autophagy Arabidopsis thaliana ABA signaling ATG5/ATG7 ABI5

A tRNA-gRNA multiplexing system for CRISPR genome editing in Marchantia polymorpha.

Authors: Frangedakis, E., Yelina, N., Eeda, S. K., Romani, F., Fragkidis, A., Haseloff, J., Hibberd, J.

Date: 2025-04-20 · Version: 1

DOI: 10.1101/2025.04.18.649274

Model Organism: Marchantia polymorpha

CRISPR/Cas9 multiplex gRNA expression tRNA-mediated processing Marchantia polymorpha thallus transformation

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