Keywords: decoding modules, transcriptome analysis, metabarcoding, SNP array, QTL mapping, barley

Latest 30 Papers

Maternal Light and Temperature Modulate Seed Longevity in Arabidopsis

Authors: Mazhari Azad, S., Gill Villar, D., Yordan, E., Mestre Pluvinet, P., Forment, J., Tarraga Herrero, S., Gonzalez, C., Ninoles Rodenes, R., Gadea, J.

Date: 2025-10-19 · Version: 1

DOI: 10.1101/2025.10.19.683148

Model Organism: Arabidopsis thaliana

seed longevity maternal environment effect Arabidopsis thaliana temperature and light interaction transcriptome analysis

Novel substrate affinity of FaCCR1 and FaCCR1/FaOCT4 expression control the content of medium-chain esters in strawberry fruit

Authors: Roldan-Guerra, F. J., Amorim-Silva, V., Jimenez, J., Mari-Albert, A., Torreblanca, R., Ruiz del Rio, J., Botella, M. A., Granell, A., Sanchez-Sevilla, J. F., Castillejo, C., Amaya, I.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679181

Model Organism: Fragaria × ananassa

volatile organic compounds medium-chain esters QTL mapping FaCCR1 FaOCT4

A century of breeding has preserved genetic variation, accumulated favorable alleles, and shaped the Rht gene portfolio in North American spring wheat

Authors: Gill, H. S., Blecha, S., Conley, E., Brault, C., Fiedler, J., Cook, J., Glover, K., Green, A., Read, A. C., Anderson, J. A.

Date: 2025-09-23 · Version: 1

DOI: 10.1101/2025.09.22.677111

Model Organism: Triticum aestivum

Hard red spring wheat genetic diversity Rht dwarfing genes SNP array KASP genotyping

From Photoperiod Thresholds to Photoperiod sensitivity: Dual Strategies for Cost-Effective Speed Breeding and Climate-Ready Barley

Authors: Rossi, N., Powell, W., Halliday, K., Sharma, R.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.04.674238

Model Organism: Hordeum vulgare

flowering time photoperiod response speed breeding allelic variation barley

QTL mapping of oat crown rust resistance in Australian fields and identification of a seedling resistance locus in oat line GS7

Authors: Nguyen, D., Lewis, D., Henningsen, E., Su, Z., Mago, R., Sperschneider, J., Dodds, P., Rattey, A., Yimer, B., Klos, K., Figueroa, M.

Date: 2025-08-27 · Version: 1

DOI: 10.1101/2025.08.24.671654

Model Organism: Avena sativa

crown rust Puccinia coronata QTL mapping KASP markers Pc61

Soil phosphate availability modulates the arbuscular mycorrhizal fungal community and mycorrhizal nutrition in wheat

Authors: Trinquier, M., Lecloux, E., Bruno, P., Gasciolli, V., Jouany, C., Roux, C., Lefebvre, B., Ardanuy, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.08.669323

Model Organism: Triticum aestivum

arbuscular mycorrhizal fungi phosphorus availability nitrogen availability wheat metabarcoding

An evolutionary leap in plant reproduction: From archegonia and motile sperm to embryo sacs and pollen tubes

Authors: Chen, D., Tang, L., Wang, F., Zhang, M., Zheng, S., Xia, M., Wu, Q., Cao, M., Jia, P., Guo, Y., Chen, F., Peng, X., Hu, J., Sun, M., Li, H., Zhang, L., Yang, W.

Date: 2025-08-06 · Version: 1

DOI: 10.1101/2025.08.04.668594

Model Organism: Ginkgo biloba

Ginkgo biloba reproductive transition transcriptome analysis pollen tube guidance MYB98-CRP-ECS module

New molecular players: siRNA expression and gene regulation in Hordeum vulgare ageing seeds after germination

Authors: Puchta-Jasinska, M., Bolc, P., Motor, A., Boczkowska, M.

Date: 2025-08-01 · Version: 1

DOI: 10.1101/2025.07.28.667253

Model Organism: Hordeum vulgare

small interfering RNAs seed viability barley RNA‑directed DNA methylation trans‑acting siRNAs

Post-Domestication selection of MKK3 Shaped Seed Dormancy and End-Use Traits in Barley

Authors: Jorgensen, M. E., Vequaud, D., Wang, Y., Andersen, C. B., Bayer, M., Box, A., Braune, K., Cai, Y., Chen, F., Antonio Cuesta-Seijo, J., Dong, H., Fincher, G. B., Gojkovic, Z., Huang, Z., Jaegle, B., Kale, S. M., Krsticevic, F., Roux, P.-M. L., Lozier, A., Lu, Q., Mascher, M., Murozuka, E., Nakamura, S., Simmelsgaard, M. U., Pedas, P. R., Pin, P., Sato, K., Spannagl, M., Rasmussen, M. W., Russell, J., Schreiber, M., Thomsen, H. C., Tulloch, S., Thomsen, N. W., Voss, C., Skadhauge, B., Stein, N., Waugh, R., Willerslev, E., Dockter, C.

Date: 2025-07-16 · Version: 1

DOI: 10.1101/2025.07.11.664137

Model Organism: Hordeum vulgare

grain dormancy pre-harvest sprouting MKK3 MAPK pathway barley

An ancient X chromosomal region harbours three genes potentially controlling sex determination in Cannabis sativa

Authors: Toscani, M., Riera-Begue, A., Malik, A., Dowling, C., Schilling, S., Melzer, R.

Date: 2025-07-03 · Version: 1

DOI: 10.1101/2025.07.03.663031

Model Organism: Cannabis sativa

sex determination monoecy dioecy QTL mapping Cannabis sativa

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