Keywords: decoding modules, transcriptome profiling, SNP array, ascorbate, proteomics, plant immunity

Latest 46 Papers

Unveiling the molecular identity of plant autophagic compartments: A proteo-lipidomic study in Arabidopsis thaliana

Authors: Lupette, J., Chambaud, C., Buridan, M., Castets, J., Wattelet-Boyer, V., Toboso Moreno, I., Kosuth, T., Yatim, C., Dittrich-Domergue, F., Gros, V., Jouhet, J., Claverol, S., Herice, C., Melser, S., Genva, M., Fouillen, L., Bessoule, J.-J., Domergue, F., Bernard, A.

Date: 2025-08-28 · Version: 1

DOI: 10.1101/2025.08.25.671700

Model Organism: Arabidopsis thaliana

autophagy phagophore membrane proteomics lipidomics membrane remodeling

NUDIX Hydrolases Target Specific Inositol Pyrophosphates and Regulate Phosphate Homeostasis and Bacterial Pathogen Susceptibility in Arabidopsis

Authors: Schneider, R., Lami, K., Prucker, I., Stolze, S. C., Strauss, A., Schmidt, J. M., Bartsch, S. M., Langenbach, K., Lange, E., Ritter, K., Furkert, D., Faiss, N., Kumar, S., Hasan, M. S., Makris, A., Krusenbaum, L., Wege, S., Belay, Y. Z., Kriescher, S., The, J., Harings, M., Grundler, F., Ried-Lasi, M. K., Schoof, H., Gaugler, P., Kamleitner, M., Fiedler, D., Nakagami, H., Giehl, R. F., Lahaye, T., Bhattacharjee, S., Jessen, H. J., Gaugler, V., Schaaf, G.

Date: 2025-08-12 · Version: 2

DOI: 10.1101/2024.10.18.619122

Model Organism: Arabidopsis thaliana

Inositol pyrophosphates NUDIX hydrolases phosphate homeostasis iron homeostasis plant immunity

Cell-type specific gating of gene regulatory modules as a hallmark of early immune responses in Arabidopsis leaves

Authors: Wang, S., Bezrukov, I., Wu, P.-J., Gauss, H., Timmermans, M., Weigel, D.

Date: 2025-08-01 · Version: 1

DOI: 10.1101/2025.08.01.668105

Model Organism: Arabidopsis thaliana

single-cell RNA sequencing Arabidopsis thaliana plant immunity PTI and ETI WRKY transcription factors

A conserved small RNA-generating gene cluster undergoes sequence diversification and contributes to plant immunity

Authors: Feng, L., Hou, Y., Toghani, A., Wang, Z., Tang, B., Atkinson, N., Li, H., Qiao, Y., Wang, Y., Hua, J., Zhai, J., Ma, W.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.20.665670

Model Organism: Arabidopsis thaliana

secondary siRNA pentatricopete repeat proteins plant immunity gene duplication co‑evolutionary arms race

Mycotoxin-driven proteome remodeling reveals limited activation of Triticum aestivum responses to emerging chemotypes integrated with fungal modulation of ergosterols

Authors: Ramezanpour, S., Alijanimamaghani, N., McAlister, J. A., Hooker, D., Geddes-McAlister, J.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.30.662327

Model Organism: Triticum aestivum

Fusarium head blight 15ADON/3ANX chemotype proteomics Triticum aestivum Fusarium graminearum

Single-cell-resolved calcium and organelle dynamics in resistosome-mediated cell death

Authors: Chen, Y.-F., Lin, K.-Y., Huang, C.-Y., Hou, L.-Y., Yuen, E. L. H., Sun, W.-C. J., Chiang, B.-J., Chang, C.-W., Wang, H.-Y., Bozkurt, T. O., Wu, C.-H.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.27.662017

Model Organism: Multi-species

NLR resistosome calcium signaling organelle disruption cell death cascade plant immunity

Proteomic analysis reveals distinct germination strategies in polymorphic fruits of Haloxylon ammodendron

Authors: Wang, Y. Z., Chen, Z. W., Zhang, H. X., Wang, Z., Jiang, M. L., Yimingniyazi, A., Ren, C.

Date: 2025-06-23 · Version: 1

DOI: 10.1101/2025.06.17.660099

Model Organism: Haloxylon ammodendron

fruit polymorphism seed germination stress tolerance proteomics Haloxylon ammodendron

Dynamic changes to the plastoglobule lipidome and proteome in heat-stressed maize

Authors: Devadasu, E., Susanto, F. A., Schilmiller, A. L., Johnny, C., Lundquist, P. K.

Date: 2025-06-19 · Version: 1

DOI: 10.1101/2025.06.13.659543

Model Organism: Zea mays

heat stress plastoglobules lipid composition Zea mays proteomics

Molecular and Phenotypic Characterization of Telomere Repeat Binding (TRBs) Proteins in Moss: Evolutionary and Functional Perspectives

Authors: Kusova, A., Hola, M., Goffova Petrova, I., Rudolf, J., Zachova, D., Skalak, J., Hejatko, J., Klodova, B., Prerovska, T., Lycka, M., Sykorova, E., Bertrand, Y. J. K., Fajkus, J., Honys, D., Prochazkova Schrumpfova, P.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.11.659030

Model Organism: Physcomitrium patens

Telomere repeat binding proteins Physcomitrium patens knockout mutants telomere maintenance transcriptome profiling

Molecular Insights into the Production of Extracellular Vesicles by Plants

Authors: Koch, B. L., Gardner, D., Smith, H., Bracewell, R., Awdey, L., Foster, J., Borniego, M. L., Munch, D. H., Nielsen, M. E., Pasupuleti, R., Trinidad, J., Rutter, B., Thordal-Christensen, H., Innes, R. W.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.16.659989

Model Organism: Arabidopsis thaliana

extracellular vesicles Arabidopsis thaliana EXO70 exocyst complex proximity labeling plant immunity

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