Keywords: decoding modules, transcriptome profiling, SNP array, metabolomics

Latest 29 Papers

Integrative Multi-Omics Analysis Reveals Stress-Specific Molecular Architectures in Soybean under Drought and Rust Infection

Authors: Husein, G., Castro-Moretti, F. R., Prado, M., Amorim, L., Mazzafera, P., Canales, J., Monteiro-Vitorello, C. B.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663534

Model Organism: Glycine max

Asian soybean rust drought stress transcriptomics metabolomics co-expression network

Introducing furanocoumarin biosynthetic genes in tomato results in coumarins accumulation and impacted growth

Authors: Bouille, A., Villard, C., Galati, G., Roumani, M., Fauvet, A., Grosjean, J., Hoengenaert, L., Boerjan, W., Ralph, J., Hilliou, F., Robin, C., Hehn, A., Larbat, R.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663522

Model Organism: Solanum lycopersicum

metabolic engineering linear furanocoumarin pathway coumarins tomato metabolomics

Molecular and Phenotypic Characterization of Telomere Repeat Binding (TRBs) Proteins in Moss: Evolutionary and Functional Perspectives

Authors: Kusova, A., Hola, M., Goffova Petrova, I., Rudolf, J., Zachova, D., Skalak, J., Hejatko, J., Klodova, B., Prerovska, T., Lycka, M., Sykorova, E., Bertrand, Y. J. K., Fajkus, J., Honys, D., Prochazkova Schrumpfova, P.

Date: 2025-06-17 · Version: 1

DOI: 10.1101/2025.06.11.659030

Model Organism: Physcomitrium patens

Telomere repeat binding proteins Physcomitrium patens knockout mutants telomere maintenance transcriptome profiling

Functional genetics of rice <em>PISTILLATA</em> genes unravels new roles and targets in flowering time, female fertility and parthenocarpy

Authors: Zamzam, M., Basak, R., Singh, S., Prakash, S., Peesapati, R., Khanday, I., Simonini, S., Grossniklaus, U., Vijayraghavan, U.

Date: 2025-03-31 · Version: 2

DOI: 10.1101/2023.08.05.552136

Model Organism: Oryza sativa

lodicule development PI paralogs (OsMADS2/OsMADS4)flowering time regulation genome-wide binding analysis transcriptome profiling

Manipulation of in planta ethylene levels modulates the metabolome of Populus tremula x tremuloides in a microbial-dependent manner.

Authors: Fracchia, F., Guinet, F., Warion, S., Bednareck, M., Chervin, C., Engle, N. L., Tschaplinski, T. J., Veneault-Fourrey, C., Deveau, A.

Date: 2025-03-17 · Version: 1

DOI: 10.1101/2025.03.17.643694

Model Organism: Populus tremula × Populus tremuloides

ethylene signaling poplar microbiota fungal and bacterial community assembly metabolomics root exudates

Temporal analysis of physiological phenotypes identifies novel metabolic and genetic underpinnings of senescence in maize

Authors: Brar, M. S., Kumar, R., Kunduru, B., McMahan, C. S., Tharayil, N., Sekhon, R. S.

Date: 2025-03-12 · Version: 1

DOI: 10.1101/2025.03.07.641920

Model Organism: Zea mays

leaf senescence staygreen metabolomics phenylpropanoids maize

Identification of QTLs linked to partial resistance to foot and root rot caused by Fusarium avenaceum and Fusarium oxysporum in faba bean (Vicia faba)

Authors: Webb, A., Thomas, J. E., Davis, H., McAdam, S., Angra, D., O'Sullivan, D. M., Gostkiewicz, K., Capozzi, M., Wood, T. A.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.21.639454

Model Organism: Vicia faba

Vicia faba Fusarium foot and root rot QTL mapping SNP array disease resistance

Metabolic network divergence: polyamine and ethylene dynamics in Arabidopsis thaliana and Solanum lycopersicum

Authors: Cermanova, K., Bublava, P., Darbandsari, M., Fellner, M., Novak, O., Karady, M.

Date: 2025-01-27 · Version: 1

DOI: 10.1101/2025.01.24.634693

Model Organism: Multi-species

polyamines ethylene precursors metabolomics Arabidopsis thaliana Solanum lycopersicum

Differential induction of Medicago truncatula defence metabolites in response to rhizobial symbiosis and pea aphid infestation

Authors: Benjamin, G., Pacoud, M., Boutet, S., Clement, G., Brouquisse, R., Gatti, J.-L., POIRIE, M., Frendo, P.

Date: 2025-01-27 · Version: 2

DOI: 10.1101/2024.08.14.607928

Model Organism: Medicago truncatula

nitrogen-fixing symbiosis Medicago truncatula aphid resistance metabolomics flavonoid biosynthesis

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