The study identifies the transcription factor MdBRC1 as a key inhibitor of bud growth during the ecodormancy phase in apple (Malus domestica), directly regulating dormancy‑associated genes and interacting with the flowering promoter MdFT2 to modulate bud break. Comparative transcriptomic analysis and gain‑of‑function experiments in poplar demonstrate that MdFT2 physically binds MdBRC1, attenuating its repressive activity and acting as a molecular switch for the transition to active growth.

The study examined how individual hormone treatments (auxin, ethylene, gibberellin) influence root architecture and ion accumulation under salt stress in three tomato accessions, revealing species-specific hormonal effects on lateral root development and Na/K ratios. Genetic analyses using Arabidopsis mutants and a tomato ethylene‑perception mutant (nr) identified novel hormonal signaling components that modulate salt stress responses, highlighting potential strategies to improve crop performance.

The study introduced full-length SOC1 genes from maize and soybean, and a partial SOC1 gene from blueberry, into tomato plants under constitutive promoters. While VcSOC1K and ZmSOC1 accelerated flowering, all three transgenes increased fruit number per plant mainly by promoting branching, and transcriptomic profiling revealed alterations in flowering, growth, and stress‑response pathways.

The study performs a bibliometric analysis of 1,702 Scopus-indexed tomato omics publications over two decades, revealing a rapid surge in output after 2017 and highlighting dominant fields such as biochemistry, genetics, and molecular biology. Citation and co‑authorship network analyses identify key contributions in microRNA research and genome sequencing, major research hubs, and collaborative clusters, while keyword mapping underscores stress response, fruit quality, and immunity as priority topics.

The study characterizes the tomato class B heat shock factor SlHSFB3a, revealing its age‑dependent expression in roots and its role in enhancing lateral root density by modulating auxin homeostasis. Overexpression of SlHSFB3a increases lateral root emergence, while CRISPR‑mediated knockouts produce the opposite phenotype, indicating that SlHSFB3a regulates auxin signaling through repression of auxin repressors and activation of the ARF7/LOB20 pathway.

The study functionally characterizes three tomato CNR/FWL proteins (SlFWL2, SlFWL4, SlFWL5) and demonstrates that SlFWL5 localizes to plasmodesmata, where it regulates leaf size and morphology by promoting cell expansion likely through cell‑to‑cell communication. Gain‑ and loss‑of‑function transgenic tomato lines reveal that SlFWL5 is a key regulator of organ growth via modulation of plasmodesmatal signaling.

The study develops an updated genome-scale metabolic model of tomato leaf (CBZ_iSL3433) incorporating carbamazepine (CBZ) transformation reactions to simulate the pollutant's stress impact under phototrophic conditions. Constraint-based analysis predicts significant reductions in biomass and altered fluxes in nutrient assimilation and secondary metabolism, which are largely ameliorated by biostimulants such as proline, spermine, glycerol, and ethanol. This framework demonstrates a systems-level approach for screening strategies to mitigate pharmaceutical pollutant stress in crops.