Keywords: decoding modules, transcriptomic reprogramming, SWI3, ascorbate, DDM1, flg22

Latest 13 Papers

Phosphite, an analog of phosphate, counteracts Phosphate Induced Susceptibility of rice to the blast fungus Magnaporthe oryzae

Authors: Mallavarapu, M. D., Martin-Cardoso, H., Bücker, G., Alussi, M., Garcia-Molina, A., San Segundo, B.

Date: 2026-01-23 · Version: 1

DOI: 10.64898/2026.01.22.700763

Model Organism: Multi-species

phosphite (Phi)phosphate (Pi)plant immunity pathogen resistance transcriptomic reprogramming

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

SWI3 regulates male sex determination in Marchantia polymorpha

Authors: Quiles, M. L., Raval, P. K., Rensing, S. A., Gould, S. B.

Date: 2025-10-30 · Version: 1

DOI: 10.1101/2025.10.29.685095

Model Organism: Marchantia polymorpha

SWI3 chromatin regulation Marchantia polymorpha gametangiophore development transcriptomics

Major alleles of CDCA7α shape CG-methylation in Arabidopsis thaliana

Authors: Bourguet, P., Lorkovic, Z. J., Casado, D. K., Bapteste, V., Cho, C. H., Igolkina, A., Lee, C.-R., Nordborg, M., Berger, F., Sasaki, E.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.03.673934

Model Organism: Arabidopsis thaliana

DNA methylation CG methylation (mCG)CDCA7 DDM1 local adaptation

BIK1-RIN4 complex links plant immunity and pathogen virulence

Authors: Lee, H., Ko, D., Kang, H., Kim, S. H., El Kasmi, F., Dangl, J. L., Chung, E.-H.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.03.673898

Model Organism: Arabidopsis thaliana

BIK1 RIN4 PAMP-triggered immunity flg22 AvrB

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

TOC1 supresses PAMP-triggered immunity in Arabidopsis

Authors: Fraser, O. J. P., Spoel, S. H., van Ooijen, G.

Date: 2025-07-18 · Version: 1

DOI: 10.1101/2025.07.16.665052

Model Organism: Arabidopsis thaliana

circadian clock PAMP-triggered immunity flg22 TOC1 overexpression Arabidopsis thaliana

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Analysing the Role of KIN10 in Directional Root Growth Regulation in Arabidopsis thaliana

Authors: Retzer, K., Garcia-Gonzalez, J., Muller, K., Lacek, J., Pree, S., Friedl, N., Weckwerth, W.

Date: 2025-04-29 · Version: 1

DOI: 10.1101/2025.04.25.650732

Model Organism: Arabidopsis thaliana

SnRK1 KIN10 carbon availability root growth regulation hormone signaling transcriptomic reprogramming

Pattern-triggered immunity in blue and white seed cultivars of Papaver somniferum

Authors: Hernandez Orozco, J. S., Iakovenko, O., Zeiner, A., Hronkova, M., Kubasek, J., Kucerova, B., Vachova, I., Pop, S., Marsik, P., Macho, M., Fojtikova, P., Rychla, A., Hejna, O., Kulich, I., Wrzaczek, M., Janda, M.

Date: 2025-02-25 · Version: 1

DOI: 10.1101/2025.02.23.639761

Model Organism: Papaver somniferum

Pattern‑triggered immunity flg22 reactive oxygen species MAPK phosphorylation Papaver somniferum

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