Keywords: decoding modules, transposable elements, ascorbate, polyamine profiling

Latest 8 Papers

Universal modules for decoding amplitude and frequency of Ca2+ signals in plants

Authors: Vergara-Valladares, F., Rubio-Melendez, M. E., Charpentier, M., Michard, E., Dreyer, I.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.13.694100

Model Organism: General

calcium signaling EF‑hand Ca2+ binding protein decoding modules plant calcium sensors signal amplitude and frequency

DNA methylation mediates transcriptional stability and transposon-driven trans-regulation under drought in wheat

Authors: Reynolds, I. J., Barratt, L. J., Harper, A. L.

Date: 2025-12-05 · Version: 1

DOI: 10.64898/2025.12.04.692301

Model Organism: Triticum aestivum

drought stress DNA methylation Triticum aestivum ROS1a demethylase transposable elements

DNA methylome responses to biotic and abiotic stress in Arabidopsis thaliana: A multi-study analysis

Authors: Behl, R., Gallo-Franco, J. J., Hazarika, R. R., Zhang, Z., Wilming, F., Schnitzler, J.-P., Lindermayr, C., Johannes, F.

Date: 2025-10-20 · Version: 1

DOI: 10.1101/2025.10.20.682861

Model Organism: Arabidopsis thaliana

DNA methylation stress response Arabidopsis thaliana transposable elements epimutations

High-Quality Draft Genome Assemblies and Comparative Genomics of Three Bouteloua Species (Poaceae: Chloridoideae)

Authors: Ganesan, M. A., Hale, C. O., Romay, M. C., Buckler, E. S., Stitzer, M. C.

Date: 2025-10-17 · Version: 1

DOI: 10.1101/2025.10.15.682643

Model Organism: Multi-species

Bouteloua PacBio HiFi genome assembly polyploidy transposable elements

Uncovering the Molecular Regulation of Seed Development and Germination in Endangered Legume Paubrasilia echinata Through Proteomic and Polyamine Analyses

Authors: Vettorazzi, R. G., Carrari-Santos, R., Sousa, K. R., Oliveira, T. R., Grativol, C., Olimpio, G., Venancio, T. M., Pinto, V. B., Quintanilha-Peixoto, G., Silveira, V., Santa-Catarna, C.

Date: 2025-10-15 · Version: 1

DOI: 10.1101/2025.10.13.682162

Model Organism: Paubrasilia echinata

seed maturation proteomics polyamine profiling stress tolerance LEA proteins

Somatic mobility of transposons is explosive and shaped by distinct integration biases in Arabidopsis thaliana

Authors: Ambreen, H., Leduque, B., Quadrana, L., Slotkin, R. K., Bousios, A., Nuetzmann, H.-W.

Date: 2025-07-18 · Version: 1

DOI: 10.1101/2025.07.14.664700

Model Organism: Arabidopsis thaliana

transposable elements somatic transposition Arabidopsis thaliana chromatin integration bias epigenetic mutants

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Atypical epigenetic and small RNA control of degenerated transposons and their fragments in clonally reproducing Spirodela polyrhiza

Authors: Dombey, R., Buendia-Avila, D., Barragan-Borrero, V., Diezma-Navas, L., Ponce-Mane, A., Vargas-Guerrero, J. M., Elias, R., Mari-Ordonez, A.

Date: 2025-01-27 · Version: 2

DOI: 10.1101/2024.04.03.587901

Model Organism: Spirodela polyrhiza

RNA-directed DNA methylation transposable elements Spirodela polyrhiza histone modifications small interfering RNAs