Genetius

AI-summarized plant biology research papers from bioRxiv

View Trends

Latest 5 Papers

Proline transporters balance the salicylic acid-mediated trade-off between regeneration and immunity in plants

Authors: Yang, L., Xu, D., Belew, Z. M., Cassia Ferreira Dias, N., Wang, L., Zhang, A., Chen, Y.-F. S., Newton, C. J., Kong, F., Zheng, Y., Yao, Y., Brewer, M. T., Teixeira, P. J. P. L., Nour-Eldin, H. H., Xu, D.

Date: 2025-11-20 · Version: 1
DOI: 10.1101/2025.11.20.689487

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study identifies wound‑induced proline transporters ProT2 and ProT3 as central regulators that link salicylic acid signaling to the suppression of de novo root regeneration (DNRR) via modulation of reactive oxygen species dynamics. Genetic loss of these transporters or pharmacological inhibition of proline transport alleviates SA‑mediated regeneration inhibition across several plant species without compromising disease resistance.

salicylic acid proline transporters de novo root regeneration reactive oxygen species immunity‑regeneration trade‑off

Developing a Molecular Toolkit to ENABLE all to apply CRISPR/Cas9-based Gene Editing in planta

Authors: Abate, B. A., Hahn, F., Chirivi, D., Betti, C., Fornara, F., Molloy, J. C., Krainer, K. M. C.

Date: 2025-11-09 · Version: 1
DOI: 10.1101/2025.11.09.687425

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The authors introduce the ENABLE(R) Gene Editing in planta toolkit, a streamlined two‑step cloning system for creating CRISPR/Cas9 knockout vectors suitable for transient or stable transformation. Validation was performed in Oryza sativa protoplasts and Arabidopsis thaliana plants, and the toolkit includes low‑cost protocols aimed at facilitating adoption in the Global South.

CRISPR/Cas9 plant gene editing low‑cost cloning Global South agriculture ENABLE(R) toolkit

Comparative gene regulatory network mapping of Brassicaceae members with differential drought tolerance

Authors: Pandiarajan, R., Lin, C.-W., Sauer, M., Rothballer, S. T., Marin-de la Rosa, N., Schwehn, P., Papadopoulou, E., Mairhormann, B., Falter-Braun, P.

Date: 2025-08-25 · Version: 1
DOI: 10.1101/2025.08.24.668636

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study mapped drought‑responsive gene regulatory networks in Arabidopsis thaliana, its tolerant relative Arabidopsis lyrata, and Eutrema salsugineum using yeast one‑hybrid screens of orthologous promoters, revealing higher network connectivity and specific TF‑promoter interactions in the tolerant species. Notable findings include an Esa‑specific expansion of bZIP interactions, differential ABA‑signalling edges, and the identification of ASIL2 as a novel stress‑responsive factor, providing a comparative framework for improving crop drought tolerance.

drought tolerance gene regulatory network Brassicaceae transcription factor interactions ABA signaling

The secreted redox sensor roGFP2-Orp1 reveals oxidative dynamics in the plant apoplast

Authors: Ingelfinger, J., Zander, L., Seitz, P. L., Trentmann, O., Tiedemann, S., Sprunck, S., Dresselhaus, T., Meyer, A. J., Müller-Schüssele, S. J.

Date: 2025-07-09 · Version: 2
DOI: 10.1101/2025.01.10.632316

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study evaluated the genetically encoded redox biosensor roGFP2-Orp1 for monitoring extracellular redox dynamics in diverse land plants, revealing that re‑oxidation rates in the apoplast differ between Physcomitrium patens and Arabidopsis thaliana and are accelerated by immune activation. Comparisons across tip‑growing cells showed no intracellular redox gradient but a partially reduced extracellular sensor in Nicotiana tabacum pollen tubes, indicating species‑ and cell‑type‑specific oxidative processes.

reactive oxygen species apoplastic redox dynamics roGFP2-Orp1 biosensor immune signaling plant model species

Exploring phenotypic and genetic variation in Lactuca with GWAS in L. sativa and L. serriola

Authors: Mehrem, S. L., Van den Ackerveken, G., Snoek, B. L.

Date: 2025-07-01 · Version: 1
DOI: 10.1101/2025.06.27.661939

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study generated a phenotypic dataset for 550 Lactuca accessions, including 20 wild relatives, and applied an iterative two‑step GWAS using a jointly processed SNP set for cultivated lettuce (L. sativa) and its wild progenitor (L. serriola) to dissect trait loci. Known and novel QTLs for anthocyanin accumulation, leaf morphology, and pathogen resistance were identified, with several L. serriola‑specific QTLs revealing unique genetic architectures, underscoring the breeding value of wild lettuce species.

Lactuca wild relatives anthocyanin accumulation leaf morphology pathogen resistance GWAS