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AI-summarized plant biology research papers from bioRxiv

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Comparative gene regulatory network mapping of Brassicaceae members with differential drought tolerance

Authors: Pandiarajan, R., Lin, C.-W., Sauer, M., Rothballer, S. T., Marin-de la Rosa, N., Schwehn, P., Papadopoulou, E., Mairhormann, B., Falter-Braun, P.

Date: 2025-08-25 · Version: 1
DOI: 10.1101/2025.08.24.668636

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study mapped drought‑responsive gene regulatory networks in Arabidopsis thaliana, its tolerant relative Arabidopsis lyrata, and Eutrema salsugineum using yeast one‑hybrid screens of orthologous promoters, revealing higher network connectivity and specific TF‑promoter interactions in the tolerant species. Notable findings include an Esa‑specific expansion of bZIP interactions, differential ABA‑signalling edges, and the identification of ASIL2 as a novel stress‑responsive factor, providing a comparative framework for improving crop drought tolerance.

drought tolerance gene regulatory network Brassicaceae transcription factor interactions ABA signaling

A drought stress-responsive metabolite malate modulates stomatal responses through G-protein-dependent pathway in grapevine and Arabidopsis

Authors: Mimata, Y., Gong, R., Pei, X., Qin, G., Ye, W.

Date: 2025-02-27 · Version: 2
DOI: 10.1101/2024.04.02.587830

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study examined how tricarboxylic acid (TCA) cycle metabolites influence drought tolerance in grapevine and Arabidopsis, finding that malate uniquely triggers stomatal closure via elevations in cytosolic Ca2+ and activation of the SLAC1 anion channel. G-proteins were shown to be essential for malate‑mediated signaling, linking metabolic changes to drought response through a second‑messenger cascade.

drought stress TCA cycle metabolites malate signaling guard cells G‑protein

Metabolic network divergence: polyamine and ethylene dynamics in Arabidopsis thaliana and Solanum lycopersicum

Authors: Cermanova, K., Bublava, P., Darbandsari, M., Fellner, M., Novak, O., Karady, M.

Date: 2025-01-27 · Version: 1
DOI: 10.1101/2025.01.24.634693

Category: Plant Biology

Model Organism: Multi-species

AI Summary

The study developed a validated LC‑MS/MS method to simultaneously quantify fourteen polyamines, amino acids, and ethylene precursors in Arabidopsis thaliana and Solanum lycopersicum, and used it to compare their metabolic responses to drought, salinity, and inhibitor treatments. Distinct species‑specific metabolic adjustments were observed, with Arabidopsis showing greater fluctuations and drought generally increasing metabolite levels, while spermine exhibited stress‑specific patterns.

polyamines ethylene precursors metabolomics Arabidopsis thaliana Solanum lycopersicum