Keywords: paralog processing, CO2 enrichment, CO2-fixing enzyme, yield, metabarcoding, transcriptomics, CRISPR/Cas9

Latest 59 Papers

Leveraging Crop Wild Relatives and Ploidy Level for Climate-Resilient Annual Ryegrass

Authors: Mailhos, M. E., Timmers, J., Erickson, J., Caram, N., Messina, C. D., Rios, E. F.

Date: 2025-10-18 · Version: 1

DOI: 10.1101/2025.10.15.682691

Model Organism: Lolium multiflorum

polyploidy climate change Lolium multiflorum CO2 enrichment evapotranspiration

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Trichoderma afroharzianum behaves differently with respect to the host transcriptome and microbial communities under varying iron availability in pea plants

Authors: Kabir, A. H., Thapa, A., Ara Saiful, S. A., Talukder, S. K.

Date: 2025-10-06 · Version: 1

DOI: 10.1101/2025.10.05.680589

Model Organism: Pisum sativum

Trichoderma afroharzianum T22 iron deficiency pea (Pisum sativum)transcriptomics root microbiome

Sorghum embryos undergoing B chromosome elimination express B-variants of mitotic-related genes

Authors: Bojdova, T., Hlouskova, L., Holusova, K., Svacina, R., Hribova, E., Ilikova, I., Thiel, J., Kim, G., Pleskot, R., Houben, A., Bartos, J., Karafiatova, M.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679447

Model Organism: Sorghum purpureosericeum

DNA elimination B chromosome Sorghum purpureosericeum kinetochore proteins transcriptomics

Predicting complex phenotypes using multi-omics data in maize

Authors: Creach, M., Webster, B., Newton, L., Turkus, J., Schnable, J., Thompson, A., VanBuren, R.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.30.679283

Model Organism: Zea mays

multi-omics trait prediction transcriptomics phenomics genotype-by-environment interaction

Candidatus Phytoplasma-induced Retrogressive Morphogenesis in Sesame (Sesamum indicum L.): Tissue-Specific Metabolic and Transcriptomic Reprogramming

Authors: Banerjee, S., Gangopadhyay, G.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.29.679221

Model Organism: Sesamum indicum

phytoplasma infection Sesamum indicum metabolomics transcriptomics tissue-specific response

Cis-regulatory architecture downstream of FLOWERING LOCUS T underlies quantitative control of flowering

Authors: Zhou, H.-R., Doan, D. T. H., Hartwig, T., Turck, F.

Date: 2025-09-25 · Version: 1

DOI: 10.1101/2025.09.23.678055

Model Organism: Arabidopsis thaliana

FLOWERING LOCUS T enhancer architecture cis‑regulatory logic CRISPR/Cas9 chromatin accessibility

Evaluation of Morpho-physiological Traits of F1 Hybrids and Estimation of Standard Heterosis of Sweet Pepper (Capsicum annuum L.) in Sylhet

Authors: Kafi, A. A., Ferdousi, J., Hossain, M. I., Islam, M. S., Nath, D. D., Karim, M. A., Roy, S. K.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.18.677104

Model Organism: Capsicum annuum

Capsicum annuum hybrid evaluation heterosis morphological traits yield

Choosing the Best Route: Comparative Optimization of Wheat Transformation Methods for Improving Yield by Targeting TaARE1-D with CRISPR/Cas9

Authors: Tek, M. I., Budak Tek, K., Sarikaya, P., Ahmed, A. R., Fidan, H.

Date: 2025-09-12 · Version: 1

DOI: 10.1101/2025.09.11.675438

Model Organism: Triticum aestivum

Triticum aestivum CRISPR/Cas9 Agrobacterium-mediated transformation TaARE1-D yield improvement

Light on its feet: Acclimation to high and low diurnal light is flexible in Chlamydomonas reinhardtii

Authors: Dupuis, S., Chastain, J. L., Han, G., Zhong, V., Gallaher, S. D., Nicora, C. D., Purvine, S. O., Lipton, M. S., Niyogi, K. K., Iwai, M., Merchant, S. S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.28.672467

Model Organism: Chlamydomonas reinhardtii

photoprotection diurnal light acclimation thylakoid ultrastructure transcriptomics proteomics

PreviousPage 3 of 6Next