Keywords: paralog processing, CO2 enrichment, ascorbate, transcriptomics, SWI3, tomato, untargeted metabolomics

Latest 64 Papers

Introducing furanocoumarin biosynthetic genes in tomato results in coumarins accumulation and impacted growth

Authors: Bouille, A., Villard, C., Galati, G., Roumani, M., Fauvet, A., Grosjean, J., Hoengenaert, L., Boerjan, W., Ralph, J., Hilliou, F., Robin, C., Hehn, A., Larbat, R.

Date: 2025-07-08 · Version: 1

DOI: 10.1101/2025.07.07.663522

Model Organism: Solanum lycopersicum

metabolic engineering linear furanocoumarin pathway coumarins tomato metabolomics

Micro RNA mediated enhanced growth in Solanum lycopersicum during cadmium hormesis

Authors: Ravi, R., Yadav, M., Kanade, S.

Date: 2025-07-06 · Version: 1

DOI: 10.1101/2025.07.04.663119

Model Organism: Solanum lycopersicum

hormesis cadmium lncRNA miRNA tomato

Medicago truncatula CORYNE modulates inflorescence meristem branching, nutrient signaling, and arbuscular mycorrhizal symbiosis

Authors: Orosz, J., Lin, E. X., Torres Ascurra, Y. C., Kappes, M., Lindsay, P. L., Bashyal, S., Everett, H., Gautam, C. K., Jackson, D., Mueller, L. M.

Date: 2025-07-02 · Version: 3

DOI: 10.1101/2024.09.20.614181

Model Organism: Medicago truncatula

CLAVATA signaling CRN pseudokinase arbuscular mycorrhizal symbiosis Meristem branching transcriptomics

Molecular characterization of flower bud dormancy under constrained temperatures unveils a shallow dormancy stage induced by cold deprivation

Authors: Fouche, M., Bonnet, H., Prigent, S., Wenden, B.

Date: 2025-07-01 · Version: 1

DOI: 10.1101/2025.06.27.661981

Model Organism: Prunus avium

winter dormancy temperature stress sweet cherry transcriptomics shallow dormancy phase

Zinc deficiency induces spatially distinct responses in roots and impacts ZIP12-dependent zinc homeostasis in Arabidopsis

Authors: Thiebaut, N., Persson, D. P., Sarthou, M., Stevenne, P., Bosman, B., Carnol, M., Fanara, S., Verbruggen, N., Hanikenne, M.

Date: 2025-06-30 · Version: 1

DOI: 10.1101/2025.06.26.661794

Model Organism: Arabidopsis thaliana

zinc deficiency root apical meristem ZIP12 transcriptomics ionomics

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Exogenous Hormone Treatments Reveal Species-Specific Regulation of Individual Components of Root Architecture and Salt Ion Accumulation in Cultivated and Wild Tomatoes

Authors: Rahmati-Ishka, M., Craft, E., Pineros, M., Julkowska, M. M.

Date: 2025-06-20 · Version: 1

DOI: 10.1101/2025.06.17.660158

Model Organism: Solanum lycopersicum

hormonal signaling root architecture salt stress Na/K ratio tomato

Thermotolerance in Chia (Salvia hispanica L.) is Mediated by Rapid Heat-Induced Transcriptomic Reprogramming and Lipid Remodelling in Leaves

Authors: Zare, T., Kehelpannala, C., Bhatnagar, A., Rupasinghe, T., Ebert, B., Fournier-Level, A., Roessner, U.

Date: 2025-06-02 · Version: 1

DOI: 10.1101/2025.05.30.656991

Model Organism: Salvia hispanica

heat stress Salvia hispanica transcriptomics lipidomics calcium signaling

FMO and CYP monooxygenase families determine the metabolic flux of hydroxylated tryptamine derivatives in barley (Hordum vulgare) following pathogen infection

Authors: Christensen, J. M., Toldam-Andersen, M. M., Jorgensen, H. J., Micic, N., Bjarnholt, N., Vijayanathan, M., Motawie, M. S., Pizaine, M., Günther, J., Kjaerulff, L., Staerk, D., Burow, M., Thodberg, S., Neilson, E. H.

Date: 2025-05-28 · Version: 1

DOI: 10.1101/2025.05.25.656007

Model Organism: Hordeum vulgare

Barley (Hordeum vulgare)Pyrenophora teres f. teres untargeted metabolomics indole alkaloids flavin‑containing monooxygenase

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

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