Keywords: paralog processing, CO2 enrichment, codon usage, transcriptome analysis, transcriptomics, climate change

Latest 55 Papers

Transcriptional responses of Solanum lycopersicum to three distinct parasites reveal host hubs and networks underlying parasitic successes

Authors: Truch, J., Jaouannet, M., Da Rocha, M., Kulhanek-Fontanille, E., Van Ghelder, C., Rancurel, C., Migliore, O., Pere, A., Jaubert, S., Coustau, C., Galiana, E., Favery, B.

Date: 2026-01-23 · Version: 1

DOI: 10.64898/2026.01.22.701158

Model Organism: Solanum lycopersicum

tomato pathogen compatibility transcriptomics co‑expression network Arabidopsis interactome

Root phenolics as potential drivers of preformed defenses and reduced disease susceptibility in a paradigm bread wheat mixture

Authors: Mathieu, L., Chloup, A., Marty, S., Savajols, J., Paysant-Le Roux, C., Launay-Avon, A., Martin, M.-L., Totozafy, J.-C., Perreau, F., Rochepeau, A., Rouveyrol, C., Petriacq, P., Morel, J.-B., Meteignier, L.-V., Ballini, E.

Date: 2026-01-14 · Version: 1

DOI: 10.64898/2026.01.13.699261

Model Organism: Triticum aestivum

root-mediated interactions bread wheat Septoria tritici blotch transcriptomics metabolomics

A novel pathosystem between Aeschynomene evenia and Aphanomyces euteiches reveals new immune components in quantitative legume root-rot resistance.

Authors: Baker, M., Martinez, Y., Keller, J., Sarrette, B., Pervent, M., Libourel, C., Le Ru, A., Bonhomme, M., Gough, C., Castel, B., ARRIGHI, J.-F., Jacquet, C.

Date: 2026-01-11 · Version: 1

DOI: 10.64898/2026.01.11.698850

Model Organism: Aeschynomene evenia

legume immunity Aphanomyces euteiches quantitative resistance transcriptomics Nod factor-independent symbiosis

A chloroplast-localized protein AT4G33780 regulates Arabidopsis development and stress-associated responses

Authors: Yang, Z.

Date: 2026-01-03 · Version: 1

DOI: 10.64898/2026.01.03.697459

Model Organism: Arabidopsis thaliana

AT4G33780 chloroplast regulator Arabidopsis thaliana transcriptomics metabolomics

Climbing invasions or climatic refugees: how many and to which extent non-native plant species could reach the Pyrenees mountains under climate change?

Authors: COLLETTE, N., GIBERT, A., PINEL, S., DELORME-HINOUX, V., BERTRAND, J. A. M.

Date: 2026-01-02 · Version: 1

DOI: 10.64898/2026.01.01.697276

Model Organism: Multi-species

invasive plant species climate change mountain refugia species distribution modeling Pyrenees

METABOLIC AND TRANSCRIPTOMIC ANALYSES IDENTIFY COORDINATED RESOURCE REALLOCATION IN RESPONSE TO PHOSPHATE SUPPLY IN HEMP

Authors: Wee Y, B., Berkowitz, O., Ng, S., Pegg, A., Whelan, J., Jost, R.

Date: 2025-12-23 · Version: 2

DOI: 10.1101/2025.09.18.677093

Model Organism: Cannabis sativa

Cannabis sativa phosphate nutrition transcriptomics source‑sink regulation nutrient signaling

Historical data reveals earlier flowering under environmental change

Authors: Stunz, E. A., Gustavsson, A. S., Bacon, C. D.

Date: 2025-12-17 · Version: 1

DOI: 10.64898/2025.12.16.694749

Model Organism: Oxyria digyna

climate change flowering phenology Oxyria digyna Arctic‑alpine plants temperature response

Natural variation in an NLR pair confers thermostable resistance to a devastating bacterial pathogen

Authors: Aoun, N., Singh, M., Chacko, J., Maruta, N., Griffiths, C., Dangla, E., Demont, H., Carrere, S., Gouzy, J., Duflos, R., Zaffuto, M., Marchetti, M., Hancock, A., Bernoux, M., Kobe, B., Deslandes, L., Roux, F., Berthome, R.

Date: 2025-12-16 · Version: 1

DOI: 10.64898/2025.12.15.694456

Model Organism: Arabidopsis thaliana

climate change NLR immune receptors RPS4/RRS1 thermostable resistance natural genetic variation

A photoprotection dial maps holistic light-stress response in diatoms

Authors: Croteau, D., Jaubert, M., Quemar, T., Falciatore, A., Maes, A., Bailleul, B.

Date: 2025-12-15 · Version: 1

DOI: 10.64898/2025.12.11.693581

Model Organism: Phaeodactylum tricornutum

non-photochemical quenching Phaeodactylum tricornutum high-light stress transcriptomics photosynthetic regulation

Molecular response of the diatom Coscinodiscus granii and its co-occurring dictyochophyte during Lagenisma coscinodisci parasite infection

Authors: Orvain, C., Bertrand, L., Moussy, A., Porcel, B. M., Vallet, M., Carradec, Q., Thurotte, A.

Date: 2025-12-12 · Version: 2

DOI: 10.1101/2025.10.10.681168

Model Organism: Coscinodiscus granii

diatom‑parasite interactions oomycete effectors Coscinodiscus granii transcriptomics metabolomics

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