Keywords: paralog processing, CO2 enrichment, comparative transcriptomics, deep learning, Arabidopsis thaliana

Latest 265 Papers

Identification of dehydrin protein complexes in vivo reveals functional interactions of LEA5 with OSCA3, PIP2B and PLDα1 in plant water-deficit stress

Authors: Fabregas, N., Rivas, F. J. M., Hernandez-Sanchez, I. E., Lozano-Elena, F., Arabi, F., Sokolowska, E., Skirycz, A., Fernie, A. R.

Date: 2025-10-27 · Version: 1

DOI: 10.1101/2025.10.27.684818

Model Organism: Arabidopsis thaliana

LEA proteins dehydrin interactome salt stress Arabidopsis thaliana protein‑protein interaction

Time- and space-resolved regulatory circuits in Arabidopsis thaliana

Authors: Zenker, S., Schiller, K., Braeutigam, A.

Date: 2025-10-24 · Version: 1

DOI: 10.1101/2025.10.23.684094

Model Organism: Arabidopsis thaliana

intermediate regulatory proteins temporal expression dynamics Arabidopsis thaliana RNA sequencing circadian regulation

Hyperspectral Imaging to Quantify Nodules and Detect Biological Nitrogen Fixation in Legumes

Authors: Wang, Y., de Silva, K., Song, D., Kamruzzaman, M., Brooks, M. D.

Date: 2025-10-24 · Version: 3

DOI: 10.1101/2025.07.25.666867

Model Organism: Multi-species

root nodules biological nitrogen fixation hyperspectral imaging deep learning legume species

Brassinosteroids promote sugar synthesis by inhibiting BIN2 phosphorylation of phosphoenolpyruvate carboxykinase

Authors: Zhang, H., Aizezi, Y., Bessho-Uehara, K., Chaudhary, A., Trinh, C. S., Xu, S.-L., Wang, Z.-Y.

Date: 2025-10-23 · Version: 1

DOI: 10.1101/2025.10.22.683954

Model Organism: Arabidopsis thaliana

brassinosteroids phosphoenolpyruvate carboxykinase phosphorylation gluconeogenesis Arabidopsis thaliana

DNA methylome responses to biotic and abiotic stress in Arabidopsis thaliana: A multi-study analysis

Authors: Behl, R., Gallo-Franco, J. J., Hazarika, R. R., Zhang, Z., Wilming, F., Schnitzler, J.-P., Lindermayr, C., Johannes, F.

Date: 2025-10-20 · Version: 1

DOI: 10.1101/2025.10.20.682861

Model Organism: Arabidopsis thaliana

DNA methylation stress response Arabidopsis thaliana transposable elements epimutations

Ethylene receptors are functionally conserved in calcium permeability across the green lineage

Authors: Yu, D., Ju, C., Feng, C., Wang, Y., Sun, Y., Gao, L., Liu, Z., Li, C., Wang, Y., He, X., Su, H., Hu, M., Meng, J., Tian, S., Liu, L., Hou, C., Kong, D., Li, L.

Date: 2025-10-20 · Version: 1

DOI: 10.1101/2025.10.20.683334

Model Organism: Arabidopsis thaliana

ethylene signaling Ca2+ permeability ETR1 receptor Arabidopsis thaliana conserved plant signaling

Impact of alternative splicing on Arabidopsis proteome

Authors: Reyes, A. V., Zhang, C., Karunadasa, S. S., Shrestha, R., Grismer, T. S., Byun, D., Xu, S.

Date: 2025-10-20 · Version: 3

DOI: 10.1101/2024.02.29.582853

Model Organism: Arabidopsis thaliana

alternative splicing isoform-specific peptides intron retention proteogenomics Arabidopsis thaliana

Maternal Light and Temperature Modulate Seed Longevity in Arabidopsis

Authors: Mazhari Azad, S., Gill Villar, D., Yordan, E., Mestre Pluvinet, P., Forment, J., Tarraga Herrero, S., Gonzalez, C., Ninoles Rodenes, R., Gadea, J.

Date: 2025-10-19 · Version: 1

DOI: 10.1101/2025.10.19.683148

Model Organism: Arabidopsis thaliana

seed longevity maternal environment effect Arabidopsis thaliana temperature and light interaction transcriptome analysis

Leveraging Crop Wild Relatives and Ploidy Level for Climate-Resilient Annual Ryegrass

Authors: Mailhos, M. E., Timmers, J., Erickson, J., Caram, N., Messina, C. D., Rios, E. F.

Date: 2025-10-18 · Version: 1

DOI: 10.1101/2025.10.15.682691

Model Organism: Lolium multiflorum

polyploidy climate change Lolium multiflorum CO2 enrichment evapotranspiration

The Arabidopsis CYSTM α 5'UTR increases protein production from transgenes in plants and bacteria.

Authors: Khanduja, J. S., Wu, X., Searle, I. R.

Date: 2025-10-18 · Version: 1

DOI: 10.1101/2025.10.15.682649

Model Organism: Arabidopsis thaliana

5'UTR enhancer CYSTM1 transgene expression heterologous expression Arabidopsis thaliana

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