Keywords: paralog processing, CO2 enrichment, phylogenetic analysis, transcriptomics

Latest 55 Papers

Genome-wide Identification, Structural Features and Single-Cell Expression Atlas of the Carbonic Anhydrase Gene Family in Maize (Zea mays L.)

Authors: Gao, Y., Zhao, C.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.21.677582

Model Organism: Zea mays

carbonic anhydrases maize single-cell RNA‑seq phylogenetic analysis stress resilience

A plant-centric investigation of Class B Flavin-dependent Monooxygenase evolution and structural diversity

Authors: Christensen, J. M., Neilson, E. H.

Date: 2025-09-16 · Version: 1

DOI: 10.1101/2025.09.16.676513

Model Organism: Multi-species

Class B flavin-dependent monooxygenases phylogenetic analysis Viridiplantae domain architecture motif analysis

Evolutionary origin and functional mechanism of Lhcx in the diatom photoprotection

Authors: Kumazawa, M., Akimoto, S., Takabayashi, A., Imaizumi, K., Tsuji, S., Hasegawa, H., Sakurai, A., Imamura, S., Ishikawa, N., Inoue-Kashino, N., Kashino, Y., Ifuku, K.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.06.674587

Model Organism: Chaetoceros gracilis

Lhcx1 non‑photochemical quenching diatom photoprotection phylogenetic analysis Chaetoceros gracilis

Light on its feet: Acclimation to high and low diurnal light is flexible in Chlamydomonas reinhardtii

Authors: Dupuis, S., Chastain, J. L., Han, G., Zhong, V., Gallaher, S. D., Nicora, C. D., Purvine, S. O., Lipton, M. S., Niyogi, K. K., Iwai, M., Merchant, S. S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.28.672467

Model Organism: Chlamydomonas reinhardtii

photoprotection diurnal light acclimation thylakoid ultrastructure transcriptomics proteomics

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

Ubiquitin-like SUMO protease expansion in rice (Oryza sativa)

Authors: Sue-ob, K., Zhang, C., Sharma, E., Bhosale, R., Sadanandom, A., Jones, A. R.

Date: 2025-08-25 · Version: 1

DOI: 10.1101/2025.08.20.671006

Model Organism: Oryza sativa

SUMOylation ULP proteases Oryza sativa phylogenetic analysis stress response

Bioherbicidal activity and host range of Teratoramularia rumicicola strain TR4 isolated from Rumex crispus in Japan

Authors: Izumi, M., Sato, T.

Date: 2025-08-07 · Version: 1

DOI: 10.1101/2025.08.06.668795

Model Organism: Rumex spp.

Rumex weeds Teratoramularia rumicicola bioherbicide host specificity phylogenetic analysis

Large-Scale Multigenome-Wide Study Predicts the Existence of Transmembrane Phosphotransfer Proteins in Plant MSP Signaling Pathway

Authors: Lomin, S. N., Brenner, W. G., Savelieva, E. M., Arkhipov, D. V., Romanov, G. A.

Date: 2025-07-31 · Version: 1

DOI: 10.1101/2025.07.28.667123

Model Organism: Arabidopsis thaliana

transmembrane HPt proteins multistep phosphorelay phylogenetic analysis molecular modeling plant signaling

A sublethal drought and rewatering time course reveals intricate patterning of responses in the annual Arabidopsis thaliana

Authors: Fitzek-Campbell, E., Psaroudakis, D., Weisshaar, B., Junker, A., Braeutigam, A.

Date: 2025-07-27 · Version: 1

DOI: 10.1101/2025.07.25.666782

Model Organism: Arabidopsis thaliana

drought stress Arabidopsis thaliana transcriptomics high‑throughput phenotyping biomarker transcripts

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

Authors: Lan, B., Ru, D., Du, F. K., Yin, K.

Date: 2025-07-26 · Version: 1

DOI: 10.1101/2025.07.22.665687

Model Organism: Festuca rubra

salt stress root growth inhibition Festuca rubra transcriptomics hormone signaling

PreviousPage 3 of 6Next