Keywords: paralog processing, CO2 enrichment, transcriptomics, Chlamydomonas reinhardtii

Latest 49 Papers

Candidatus Phytoplasma-induced Retrogressive Morphogenesis in Sesame (Sesamum indicum L.): Tissue-Specific Metabolic and Transcriptomic Reprogramming

Authors: Banerjee, S., Gangopadhyay, G.

Date: 2025-10-01 · Version: 1

DOI: 10.1101/2025.09.29.679221

Model Organism: Sesamum indicum

phytoplasma infection Sesamum indicum metabolomics transcriptomics tissue-specific response

Enhancer-driven random gene overexpression (ERGO): a method to study gene function in Chlamydomonas

Authors: Lihanova, Y., Craig, R. J., Pribbernow, M., Goss, R., Sasso, S.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.05.674469

Model Organism: Chlamydomonas reinhardtii

activation tagging carotenoid metabolism enhancer-driven overexpression Chlamydomonas reinhardtii high-light stress

Light on its feet: Acclimation to high and low diurnal light is flexible in Chlamydomonas reinhardtii

Authors: Dupuis, S., Chastain, J. L., Han, G., Zhong, V., Gallaher, S. D., Nicora, C. D., Purvine, S. O., Lipton, M. S., Niyogi, K. K., Iwai, M., Merchant, S. S.

Date: 2025-09-02 · Version: 1

DOI: 10.1101/2025.08.28.672467

Model Organism: Chlamydomonas reinhardtii

photoprotection diurnal light acclimation thylakoid ultrastructure transcriptomics proteomics

DECREASE IN DNA METHYLATION 1-mediated epigenetic regulation maintains gene expression balance required for heterosis in Arabidopsis thaliana

Authors: Matsuo, K., Wu, R., Yonechi, H., Murakami, T., Takahashi, S., Kamio, A., Akter, M. A., Kamiya, Y., Nishimura, K., Matsuura, T., Tonosaki, K., Shimizu, M., Ikeda, Y., Kobayashi, H., Seki, M., Dennis, E. S., Fujimoto, R.

Date: 2025-08-26 · Version: 1

DOI: 10.1101/2025.08.21.671646

Model Organism: Arabidopsis thaliana

heterosis DNA methylation DDM1 Arabidopsis thaliana transcriptomics

CIA5 INTERACTS WITH THE ZINC CHAPERONE ZNG3 TO BALANCECARBON AND ZINC METABOLISM

Authors: Kusi-Appiah, G., Schmollinger, S., Mamo, A., Stainbrook, S. C., O'Halloran, T. V., Strenkert, D.

Date: 2025-08-20 · Version: 1

DOI: 10.1101/2025.08.16.670667

Model Organism: Chlamydomonas reinhardtii

Chlamydomonas reinhardtii carbon concentrating mechanism zinc metabolism Cia5 ZNG3

A sublethal drought and rewatering time course reveals intricate patterning of responses in the annual Arabidopsis thaliana

Authors: Fitzek-Campbell, E., Psaroudakis, D., Weisshaar, B., Junker, A., Braeutigam, A.

Date: 2025-07-27 · Version: 1

DOI: 10.1101/2025.07.25.666782

Model Organism: Arabidopsis thaliana

drought stress Arabidopsis thaliana transcriptomics high‑throughput phenotyping biomarker transcripts

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

Authors: Lan, B., Ru, D., Du, F. K., Yin, K.

Date: 2025-07-26 · Version: 1

DOI: 10.1101/2025.07.22.665687

Model Organism: Festuca rubra

salt stress root growth inhibition Festuca rubra transcriptomics hormone signaling

The transcriptional mechanism behind Mimosa pudica leaf-folding in response to mechanical disturbance

Authors: Buti, M., Checcucci, A., Vergata, C., Renna, L., Pollastri, S., Loreto, F., Mancuso, S., Martinelli, F.

Date: 2025-07-21 · Version: 1

DOI: 10.1101/2025.07.17.665295

Model Organism: Mimosa pudica

Mimosa pudica mechanical stress chlorophyll fluorescence transcriptomics stress‑responsive gene expression

A nuclear CobW/WW-domain factor represses the CO2-concentrating mechanism in the green alga Chlamydomonas reinhardtii

Authors: Shimamura, D., Yasuda, J., Yamahara, Y., Nakano, H., Ozawa, S.-I., Tokutsu, R., Yamagami, A., Matsushita, T., Takahashi, Y., Nakano, T., Fukuzawa, H., Yamano, T.

Date: 2025-07-14 · Version: 1

DOI: 10.1101/2025.07.09.663896

Model Organism: Chlamydomonas reinhardtii

CO2-concentrating mechanism CBP1 (CCM1-binding protein 1)Chlamydomonas reinhardtii nuclear repression carbonic anhydrase

Enhancement of Arabidopsis growth by Enterobacter sp. SA187 under elevated CO2 is dependent on ethylene signalling activation and primary metabolism reprogramming

Authors: Ilyas, A., Mauve, C., Pateyron, S., Paysant-Le Roux, C., Bigeard, J., Hodges, M., de Zelicourt, A.

Date: 2025-07-09 · Version: 1

DOI: 10.1101/2025.07.08.663752

Model Organism: Arabidopsis thaliana

Enterobacter sp. SA187 elevated CO2 Arabidopsis thaliana phytohormone signaling transcriptomics

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