The study created a system that blocks root‑mediated signaling between wheat varieties in a varietal mixture and used transcriptomic and metabolomic profiling to reveal that root chemical interactions drive reduced susceptibility to Septoria tritici blotch, with phenolic compounds emerging as key mediators. Disruption of these root signals eliminates both the disease resistance phenotype and the associated molecular reprogramming.
The study examined chromosomal evolution across 230 Andropogoneae species using literature/database surveys and phylogenetic analysis of complete plastome sequences, with Bayesian inference for ancestral state reconstruction. It found extensive chromosome-number variation (2n = 8–140), 30% polyploidy, and identified 2n = 20 as the likely ancestral state, highlighting the dynamic nature of chromosomal changes in the tribe.
The authors compiled and standardized published data on Rubisco dark inhibition for 157 flowering plant species, categorizing them into four inhibition levels and analyzing phylogenetic trends. Their meta‑analysis reveals a complex, uneven distribution of inhibition across taxa, suggesting underlying chloroplast microenvironment drivers and providing a new resource for future photosynthesis improvement efforts.
The study introduces a data-augmented adaptive multiple importance sampling (DA‑AMIS) framework that combines Bayesian inference with stochastic epidemic modeling to estimate transmission parameters of banana bunchy top virus from a small 24‑plant field experiment. Validation with independent BBTV trial data from Burundi and Malawi confirmed the robustness of the estimated primary and secondary infection rates, revealing a 12% infection risk from replanting suckers and pinpointing April as the period of peak infection for targeted surveillance.
Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)
Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.
The study examined how polyploidy, hybridization, and incomplete lineage sorting affect phylogenetic reconstructions in the genus Packera, evaluating several published paralog‑processing pipelines. Results showed that the choice of orthology and paralog handling methods markedly altered tree topology, time‑calibrated phylogenies, biogeographic histories, and detection of ancient reticulation, underscoring the need for careful methodological selection alongside comprehensive taxon sampling.
The study presents an optimized Agrobacterium-mediated transformation protocol for bread wheat that incorporates a GRF4‑GIF1 fusion to enhance regeneration and achieve genotype‑independent transformation across multiple cultivars. The approach consistently improves transformation efficiency while limiting pleiotropic effects, offering a versatile platform for functional genomics and gene editing in wheat.