Keywords: paralog processing, CO2-fixing enzyme, ascorbate, transcriptome, ELF3, PIF transcription factors

Latest 12 Papers

The circadian clock gates lateral root development

Authors: Nomoto, S., Mamerto, A., Ueno, S., Maeda, A. E., Kimura, S., Mase, K., Kato, A., Suzuki, T., Inagaki, S., Sakaoka, S., Nakamichi, N., Michael, T. P., Tsukagoshi, H.

Date: 2026-01-15 · Version: 1

DOI: 10.64898/2026.01.14.699582

Model Organism: Arabidopsis thaliana

circadian clock ELF3 lateral root development hormonal signaling Arabidopsis thaliana

EARLY FLOWERING 3 (ELF3): a novel role in integrating environmental stimuli with root stem cell niche maintenance

Authors: Eljebbawi, A., Burkart, R. C., Czempik, L., Strotmann, V. I., Lai, X., Tully, M. D., Costa, L., Zubieta, C., Hutin, S., Stahl, Y.

Date: 2026-01-13 · Version: 1

DOI: 10.64898/2026.01.12.699078

Model Organism: Arabidopsis thaliana

stem cell niche ELF3 PLT3 condensate formation intrinsically disordered prion-like domains

Rubisco Dark Inhibition in Angiosperms Shows a Complex Distribution Pattern

Authors: Nehls-Ramos, C., Carmo-Silva, E., Orr, D. J.

Date: 2025-11-20 · Version: 1

DOI: 10.1101/2025.11.20.689527

Model Organism: Multi-species

Rubisco dark inhibition flowering plants phylogenetic analysis photosynthetic regulation CO2-fixing enzyme

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Shedding light on cuticle formation: phytochrome B and downstream signaling events controlling cuticle deposition in tomato fruits

Authors: Fernandes, L. D. L. G., Orsi, B., Moreira, J. d. R., Oliveira, P. P. d. A., Ueda, J. N. M., Demarco, D., Andrade, S. C. d. S., Rothan, C., Rossi, M., Freschi, L.

Date: 2025-09-16 · Version: 1

DOI: 10.1101/2025.09.11.675555

Model Organism: Solanum lycopersicum

Tomato cuticle PHYB signaling far‑red light PIF transcription factors Botrytis susceptibility

Tomato leaf transcriptomic changes promoted by long-term water scarcity stress can be largely prevented by a fungal-based biostimulant

Authors: Lopez-Serrano, L., Ferez-Gomez, A., Romero-Aranda, R., Jaime Fernandez, E., Leal Lopez, J., Fernandez Baroja, E., Almagro, G., Dolezal, K., Novak, O., Diaz, L., Bautista, R., Leon Morcillo, R. J., Pozueta Romero, J.

Date: 2025-06-28 · Version: 1

DOI: 10.1101/2025.06.26.661737

Model Organism: Solanum lycopersicum

water deficit Trichoderma harzianum culture filtrate tomato drought tolerance transcriptome

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Early Flowering 3 (ELF3) inhibits hypocotyl phototropism in light-grown Arabidopsis seedlings.

Authors: Cobb, G., Krahmer, J., Nawkar, G. M., Boccaccini, A., Fankhauser, C.

Date: 2025-04-15 · Version: 1

DOI: 10.1101/2025.04.09.647958

Model Organism: Arabidopsis thaliana

phototropism ELF3 Evening Complex PIF transcription factors circadian regulation

Data-driven mathematical modelling explains altered timing of EARLY FLOWERING 3 in the wheat circadian oscillator

Authors: Upadhyay, A., Rowland-Chandler, J., Stewart-Wood, J., Pingarron-Cardenas, G., Tokuda, I. T., Webb, A. A., Locke, J. C.

Date: 2025-04-08 · Version: 1

DOI: 10.1101/2025.04.08.644541

Model Organism: Triticum aestivum

circadian rhythm ELF3 wheat TOC1 repression computational modeling

ELF3 controls trait heterogeneity by tuning the rate of maturation in Arabidopsis and barley

Authors: McCarthy, K., Pook, H., Redmond, E. J., Ronald, J., Keir, J., Zhu, Z., Quint, M., Davis, P. A., Hartley, S. E., Davis, S., Ezer, D.

Date: 2025-03-26 · Version: 1

DOI: 10.1101/2025.03.24.644900

Model Organism: Multi-species

ELF3 trait heterogeneity developmental timing bet-hedging osmotic stress resilience

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