Keywords: paralog processing, CO2-fixing enzyme, comparative transcriptomics, Phytophthora infestans

Latest 17 Papers

Network analysis of flowering time genes suggests regulatory changes among SOC1 orthologues in response to cold in Brassica napus

Authors: Sidhu, G. S., Burrows, S., Woolfenden, H., Wells, R., Morris, R. J.

Date: 2026-01-20 · Version: 2

DOI: 10.64898/2025.12.16.694548

flowering time gene regulatory network comparative transcriptomics Brassica napus subfunctionalisation

Population structure of Phytophthora infestans collected from potatoes in Ecuador, Colombia, Peru, Bolivia and Uruguay

Authors: Izarra, M. L., Coca-Morante, M., Perez, W., Sanchez, L., Gamboa, S., Valle, D., Cuaran, V., Guerra-Sierra, B. E., Kreuze, J. F.

Date: 2026-01-14 · Version: 1

DOI: 10.64898/2026.01.14.699522

Model Organism: General

Phytophthora infestans late blight genetic diversity clonal lineage mitochondrial haplotype

Rubisco Dark Inhibition in Angiosperms Shows a Complex Distribution Pattern

Authors: Nehls-Ramos, C., Carmo-Silva, E., Orr, D. J.

Date: 2025-11-20 · Version: 1

DOI: 10.1101/2025.11.20.689527

Model Organism: Multi-species

Rubisco dark inhibition flowering plants phylogenetic analysis photosynthetic regulation CO2-fixing enzyme

Antirrhinum flower shape: unravelling gene expression across developmental axes and boundaries

Authors: Cunha, A. M., Raimundo, J., Verweij, A., Bradley, D., Coen, E., Costa, M. M. R.

Date: 2025-11-11 · Version: 1

DOI: 10.1101/2025.11.10.687484

Model Organism: Antirrhinum majus

Antirrhinum majus dorsoventral axis patterning comparative transcriptomics AmCYC/AmDIV transcription factors NGATHA‑LIKE1‑miR164 regulatory module

Symbiotic diversification relies on an ancestral gene network in plants

Authors: Castanedo, L., Melkonian, K., Vernie, T., Chauderon, L., Pellen, T., Bianconi, M., Lefort, C., Libourel, C., Le Ru, A., Aziz, S., Latorre, C., Thiercelin, O., Rodde, N., Cauet, S., Callot, C., Forrest, L., Nishiyama, T., Wickell, D., Li, F.-W., Keller, J., Delaux, P.-M.

Date: 2025-11-03 · Version: 2

DOI: 10.1101/2025.04.01.646537

Model Organism: Marchantia paleacea

ericoid mycorrhizae intracellular symbiosis ancestral gene module liverwort comparative transcriptomics

Diverse haplotypes at a complex Solanum americanum locus confer resistance to Phytophthora infestans and P. capsici

Authors: Heal, R., Olave-Achury, A. C., Sindalovskaya, M., Long, L., Karki, H. S., Taylor, J., Wawryk-Khamdavong, A., Bachowska, K., Smoker, M., Alam, M., Pottinger, S., Arora, V., Sohn, K. H., Witek, K., Lin, X., Jones, J. D. G.

Date: 2025-10-31 · Version: 1

DOI: 10.1101/2025.10.31.685743

Model Organism: Solanum americanum

NLR immune receptors Phytophthora capsici Phytophthora infestans Solanum americanum RXLR effector screening

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Phosphoinositide-specific Phospholipase C 2 (SlPLC2) Facilitates Vesicle Formation and Modulates Immune Signaling in Tomato Phytophthora infestans Interactions

Authors: Perk, E. A., D'Ambrosio, J. M., Cerrudo, I., Robuschi, L., Juarez, M., Velez, P., Mary, V., Theumer, M., Segretin, M. E., Laxalt, A. M.

Date: 2025-09-21 · Version: 1

DOI: 10.1101/2025.09.21.677499

Model Organism: Solanum lycopersicum

Phosphoinositide-specific phospholipase C SlPLC2 Phytophthora infestans Tomato susceptibility factor

Phenotypic and Genotypic Characterization of the Population of Phytophthora infestans in Brazil

Authors: Silva, M. G., Alves, G., Araujo, L. d. C., Alves Santos de Oliveira, S., Mizubuti, E. S. G.

Date: 2025-09-07 · Version: 1

DOI: 10.1101/2025.09.03.673969

Model Organism: Phytophthora infestans

Phytophthora infestans mating type microsatellite genotyping mitochondrial DNA haplotype mefenoxam sensitivity

A plant pathogen effector blocks stepwise assembly of a helper NLR resistosome

Authors: Seager, B. A., Harant, A., Contreras, M. P., Hou, L.-Y., Wu, C.-H., Kamoun, S., Madhuprakash, J.

Date: 2025-07-14 · Version: 1

DOI: 10.1101/2025.07.14.664264

Model Organism: Solanum lycopersicum

helper NLR resistosome assembly Cryo-EM AVRcap1b Phytophthora infestans

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