Keywords: paralog processing, CO2-fixing enzyme, metabarcoding, CLPC2, ascorbate, lipidomics

Latest 11 Papers

CLPC2 plays specific roles in CLP complex-mediated regulation of growth, photosynthesis, embryogenesis and response to growth-promoting microbial compounds

Authors: Leal-Lopez, J., Bahaji, A., De Diego, N., Tarkowski, P., Baroja-Fernandez, E., Munoz, F. J., Almagro, G., Perez, C. E., Bastidas-Parrado, L. A., Loperfido, D., Caporalli, E., Ezquer, I., Lopez-Serrano, L., Ferez-Gomez, A., Coca-Ruiz, V., Pulido, P., Morcillo, R. J. L., Pozueta-Romero, J.

Date: 2025-11-28 · Version: 1

DOI: 10.1101/2025.11.25.690394

Model Organism: Arabidopsis thaliana

CLPC2 microbial volatile compounds chloroplast CLP protease proteomics Arabidopsis thaliana

Rubisco Dark Inhibition in Angiosperms Shows a Complex Distribution Pattern

Authors: Nehls-Ramos, C., Carmo-Silva, E., Orr, D. J.

Date: 2025-11-20 · Version: 1

DOI: 10.1101/2025.11.20.689527

Model Organism: Multi-species

Rubisco dark inhibition flowering plants phylogenetic analysis photosynthetic regulation CO2-fixing enzyme

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

Unveiling the molecular identity of plant autophagic compartments: A proteo-lipidomic study in Arabidopsis thaliana

Authors: Lupette, J., Chambaud, C., Buridan, M., Castets, J., Wattelet-Boyer, V., Toboso Moreno, I., Kosuth, T., Yatim, C., Dittrich-Domergue, F., Gros, V., Jouhet, J., Claverol, S., Herice, C., Melser, S., Genva, M., Fouillen, L., Bessoule, J.-J., Domergue, F., Bernard, A.

Date: 2025-08-28 · Version: 1

DOI: 10.1101/2025.08.25.671700

Model Organism: Arabidopsis thaliana

autophagy phagophore membrane proteomics lipidomics membrane remodeling

Soil phosphate availability modulates the arbuscular mycorrhizal fungal community and mycorrhizal nutrition in wheat

Authors: Trinquier, M., Lecloux, E., Bruno, P., Gasciolli, V., Jouany, C., Roux, C., Lefebvre, B., Ardanuy, A.

Date: 2025-08-09 · Version: 1

DOI: 10.1101/2025.08.08.669323

Model Organism: Triticum aestivum

arbuscular mycorrhizal fungi phosphorus availability nitrogen availability wheat metabarcoding

Thermotolerance in Chia (Salvia hispanica L.) is Mediated by Rapid Heat-Induced Transcriptomic Reprogramming and Lipid Remodelling in Leaves

Authors: Zare, T., Kehelpannala, C., Bhatnagar, A., Rupasinghe, T., Ebert, B., Fournier-Level, A., Roessner, U.

Date: 2025-06-02 · Version: 1

DOI: 10.1101/2025.05.30.656991

Model Organism: Salvia hispanica

heat stress Salvia hispanica transcriptomics lipidomics calcium signaling

Dynamic changes to the plastoglobule lipidome and proteome in water-deficient maize

Authors: Devadasu, E., Schilmiller, A. L., Gonzalez, N., Lundquist, P. K.

Date: 2025-05-30 · Version: 1

DOI: 10.1101/2025.05.26.656201

Model Organism: Zea mays

drought resilience plastoglobules lipidomics quantitative proteomics Zea mays

Arabidopsis lines with modified ascorbate concentrations reveal a link between ascorbate and auxin biosynthesis

Authors: Fenech, M., Zulian, V., Moya-Cuevas, J., Arnaud, D., Morilla, I., Smirnoff, N., Botella, M. A., Stepanova, A. N., Alonso, J. M., Martin-Pizarro, C., Amorim-Silva, V.

Date: 2025-05-16 · Version: 1

DOI: 10.1101/2025.05.15.654287

Model Organism: Arabidopsis thaliana

ascorbate Arabidopsis thaliana auxin biosynthesis redox homeostasis transcriptomics

Arabidopsis root lipid droplets are hubs for membrane homeostasis under heat stress, and triterpenoid synthesis and storage.

Authors: Scholz, P., Dabisch, J., Clews, A. C., Niemeyer, P. W., Vilchez, A. C., Lim, M. S. S., Sun, S., Hembach, L., Dreier, F., Blersch, K., Preuss, L., Bonin, M., Lesch, E., Iwai, Y., Shimada, T., Eirich, J., Finkemeier, I., Gutbrod, K., Doermann, P., Wang, Y., Mullen, R. T., Ischebeck, T.

Date: 2025-03-26 · Version: 1

DOI: 10.1101/2025.03.24.644787

Model Organism: Arabidopsis thaliana

lipid droplets heat stress Arabidopsis thaliana roots triterpene biosynthesis lipidomics

Diverse Pseudomonas species engage in beneficial and suppressive interactions with the kiwifruit pathogen Psa across Actinidia germplasm

Authors: Patterson, H. R., Hemara, L. M., Templeton, M. D., Jayaraman, J.

Date: 2025-02-03 · Version: 1

DOI: 10.1101/2025.01.31.635981

Model Organism: Actinidia chinensis

Pseudomonas syringae pv. actinidiae Actinidia chinensis metabarcoding qPCR detection pathogenic bacterial consortia

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