Keywords: paralog processing, CO2-fixing enzyme, transcriptomic analysis, tomato, Arabidopsis

Latest 35 Papers

Molecular basis of delayed leaf senescence induced by short-term treatment with low phosphate in rice

Authors: Martin-Cardoso, H., Bundo, M., Garcia-Molina, A., San Segundo, B.

Date: 2026-01-24 · Version: 1

DOI: 10.64898/2026.01.23.701354

phosphate deficiency leaf senescence Oryza sativa CRISPR/Cas9 transcriptomic analysis

Transcriptional responses of Solanum lycopersicum to three distinct parasites reveal host hubs and networks underlying parasitic successes

Authors: Truch, J., Jaouannet, M., Da Rocha, M., Kulhanek-Fontanille, E., Van Ghelder, C., Rancurel, C., Migliore, O., Pere, A., Jaubert, S., Coustau, C., Galiana, E., Favery, B.

Date: 2026-01-23 · Version: 1

DOI: 10.64898/2026.01.22.701158

Model Organism: Solanum lycopersicum

tomato pathogen compatibility transcriptomics co‑expression network Arabidopsis interactome

Features affecting Cas9-Induced Editing Efficiency and Patterns in Tomato: Evidence from a Large CRISPR Dataset

Authors: Cucuy, A., Ben-Tov, D., Melamed-Bessudo, C., Honig, A., Cohen, B. A., Levy, A. A.

Date: 2026-01-07 · Version: 1

DOI: 10.64898/2026.01.06.696182

Model Organism: Solanum lycopersicum

CRISPR/Cas9 ATAC-seq chromatin accessibility microhomology‑mediated end joining tomato

Root-Suppressed Phenotype of Tomato Rs Mutant is Seemingly Related to Expression of Root-Meristem-Specific Sulfotransferases

Authors: Kumari, A., Gupta, P., Santisree, P., Pamei, I., Valluri,, S., Sharma, K., Venkateswara Rao, K., Shukla, S., Nama, S., Sreelakshmi, Y., Sharma, R.

Date: 2026-01-03 · Version: 1

DOI: 10.64898/2026.01.03.697460

Model Organism: Solanum lycopersicum

root development sulfur metabolism sulfotransferase radiation‑induced mutant tomato

A Solanoeclepin A precursor functions as a new rhizosphere signaling molecule recruiting growth-promoting microbes under nitrogen deficiency

Authors: Abedini, D., Guerrieri, A., Jain, R., White, F., Koomen, J., Yang, Y., Wang, K., Kramer, G., Bouwmeester, H., Dong, L.

Date: 2025-12-29 · Version: 1

DOI: 10.64898/2025.12.29.696744

Model Organism: Solanum lycopersicum

Solanoeclepin A nitrogen deficiency rhizosphere microbiome Massilia tomato

Do stomatal movements have a limited dynamic range?

Authors: Muraya, F., Siqueira, J. A., Very, A.-A., Roelfsema, R.

Date: 2025-12-26 · Version: 1

DOI: 10.64898/2025.12.22.695892

Model Organism: Arabidopsis thaliana

stomatal conductance potassium transporters GORK channel AtKUP2/6/8 Arabidopsis

Quantitative trait locus mapping of root exudate metabolome in a Solanum lycopersicum Moneymaker x S. pimpinellifolium RIL population and their putative links to rhizosphere microbiome

Authors: Kim, B., Kramer, G., Leite, M. F. A., Snoek, B. L., Zancarini, A., Bouwmeester, H.

Date: 2025-12-17 · Version: 1

DOI: 10.64898/2025.12.17.693946

Model Organism: Solanum lycopersicum

root exudates untargeted metabolomics quantitative trait loci tomato plant‑microbe interactions

KDM7-mediated oxygen sensing reprograms chromatin to enhance hypoxia tolerance in the root

Authors: Zhang, D., Chirinos, X., Del Chiaro, A., Shukla, V., Ryder, A., Beltran, A. D. P., Iacopino, S., Bota, P., Zivkovic, D., Fioriti, F., Telara, Y., Ellison, C. J., Costa, F., Elliott, P. R., Giorgi, F., Giuntoli, B., Flashman, E. G., Abreu, I., Licausi, F.

Date: 2025-11-26 · Version: 1

DOI: 10.1101/2025.11.24.690241

Model Organism: Arabidopsis thaliana

hypoxia root meristem H3K4 trimethylation KDM7 demethylase Arabidopsis

Rubisco Dark Inhibition in Angiosperms Shows a Complex Distribution Pattern

Authors: Nehls-Ramos, C., Carmo-Silva, E., Orr, D. J.

Date: 2025-11-20 · Version: 1

DOI: 10.1101/2025.11.20.689527

Model Organism: Multi-species

Rubisco dark inhibition flowering plants phylogenetic analysis photosynthetic regulation CO2-fixing enzyme

Key molecular and cellular events of table olive fruit abscission zone formation during natural maturation and after ethephon treatment

Authors: Wang, M., Santos, E., Eagle, S., Chernikova, A., Zhang, S., Tran, P., Marino, G., Jernstedt, J., Niederholzer, F., Wheeler-Dykes, B., Wilkop, T., Ferguson, L., Drakakaki, G.

Date: 2025-11-12 · Version: 1

DOI: 10.1101/2025.11.10.687704

Model Organism: Olea europaea

abscission zone Olea europaea transcriptomic analysis cell wall remodeling alkalinization

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