Keywords: paralog processing, CO2-fixing enzyme, yield, wheat, transcriptomics, metabarcoding, Arabidopsis thaliana

Latest 292 Papers

Broad application of plant protein tagging with ALFA tag for nanobody-based imaging and biochemical approaches

Authors: Neveu, J., Spielmann, J., Fanara, S., Delesalle, C., Cantaloube, S., Vert, G.

Date: 2025-03-19 · Version: 1

DOI: 10.1101/2025.03.19.644120

ALFA tag ALFA Nanobody protein detection Arabidopsis thaliana super‑resolution microscopy

The Global Wheat Full Semantic Organ Segmentation (GWFSS) dataset

Authors: Wang, Z., Zenkl, R., Greche, L., De Solan, B., Bernigaud Samatan, L., Ouahid, S., Visioni, A., Robles-Zazueta, C. A., Pinto, F., Perez-Olivera, I., Reynolds, M. P., Zhu, C., Liu, S., D'argaignon, M.-P., Lopez-Lozano, R., Weiss, M., Marzougui, A., Roth, L., Dandrifosse, S., Carlier, A., Dumont, B., Mercatoris, B., Fernandez, J., Chapman, S., Najafian, K., Stavness, I., Wang, H., Guo, W., Virlet, N., Hawkesford, M., Chen, Z., David, E., Gillet, J., Irfan, K., Comar, A., Hund, A.

Date: 2025-03-19 · Version: 1

DOI: 10.1101/2025.03.18.642594

Model Organism: Triticum aestivum

wheat semantic segmentation computer vision deep learning phenotyping

Cell-type specific autophagy in root hair forming cells is essential for salt stress tolerance in Arabidopsis thaliana

Authors: Zhao, J., Loefke, C., Yeung, K. C., Chen, Y., Dagdas, Y.

Date: 2025-03-18 · Version: 1

DOI: 10.1101/2025.03.18.643786

Model Organism: Arabidopsis thaliana

autophagy trichoblast Arabidopsis thaliana salt stress cell-type-specific regulation

PWO proteins are associated with PRC2 since their emergence in vascular plants

Authors: Khan, A., Haider, S., Sharaf, A., Kusova, A., Skalak, J., Jourdain, C., Rennie, M., Schrumpfova, P. P., Hejatko, J., Schubert, D., Farrona, S., Mozgova, I.

Date: 2025-03-17 · Version: 1

DOI: 10.1101/2025.03.15.643013

Model Organism: Arabidopsis thaliana

PWO1 Polycomb Repressive Complex 2 Arabidopsis thaliana evolutionary conservation C‑terminal alpha‑helix (c‑motif)

The Arabidopsis TIRome informs the design of artificial TIR (Toll/interleukin-1 receptor) domain proteins

Authors: Bayless, A. M., Song, L., Sorbello, M., Ogden, S. C., Todd, T. S., Flint, A., Maruta, N., Tulu, J., Drenichev, M., Ntoukakis, V., Ve, T., Mobli, M., Wan, L., Liu, Q., Dangl, J. L., Kobe, B., Grant, M., Nishimura, M. T.

Date: 2025-03-17 · Version: 1

DOI: 10.1101/2025.03.15.643477

Model Organism: Arabidopsis thaliana

TIR domain Arabidopsis thaliana immune signaling BB‑loop synthetic TIR engineering

Fast activated outward cation channel activation allows H+-ATPase and anion channel reactivation upon strong depolarization in young root hairs of Arabidopsis thaliana

Authors: Bouteau, f., Reboutier, D., Dauphin, A.

Date: 2025-03-14 · Version: 1

DOI: 10.1101/2025.03.14.643228

Model Organism: Arabidopsis thaliana

root hair ion transport plasma membrane outward current voltage clamp Arabidopsis thaliana

Two distinct oscillatory auxin signals define the plasticity of lateral rooting in Arabidopsis thaliana

Authors: Ren, C., Bodendorf, J., Moreno-Risueno, M. A., Kleine-Vehn, J.

Date: 2025-03-14 · Version: 2

DOI: 10.1101/2024.08.16.608248

Model Organism: Arabidopsis thaliana

auxin oscillations lateral root pre‑branch sites Arabidopsis thaliana light signaling environmental integration

Delay in flowering time in Col-0 under water deficit and in ddc triple knockout mutant

Authors: Vatov, E., Gechev, T.

Date: 2025-03-13 · Version: 1

DOI: 10.1101/2025.03.11.642597

Model Organism: Arabidopsis thaliana

cytosine methylation flowering time water deficit Arabidopsis thaliana BBX16/BBX17

Cysteine signaling in plant pathogen response

Authors: Moormann, J., Heinemann, B., Angermann, C., Koprivova, A., Armbruster, U., Kopriva, S., Hildebrandt, T. M.

Date: 2025-03-13 · Version: 1

DOI: 10.1101/2025.03.13.642987

Model Organism: Arabidopsis thaliana

cysteine homeostasis plant immune signaling proteome response Arabidopsis thaliana Pseudomonas syringae

Designer antisense circRNAGFP reduces GFP protein abundance in Arabidopsis protoplasts in a sequence-specific manner, independent of RNAi pathways

Authors: Hossain, M., Pfafenroth, C., Nasfi, S., Sede, A. R., Imani, J., Secic, E., Galli, M., Schaefer, P., Bindereif, A., Heinlein, M., Ladera, M., Kogel, K.-H.

Date: 2025-03-12 · Version: 2

DOI: 10.1101/2023.11.20.567890

Model Organism: Arabidopsis thaliana

circular RNA Arabidopsis thaliana targeted gene regulation RNAi‑independent pattern‑triggered immunity

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