Keywords: paralog processing, CRISPR/Cas9, ascorbate, Physcomitrium patens

Latest 32 Papers

CRISPR/Cas9 targeted genetic screening in Physcomitrella identifies novel cell division genes

Authors: Maekawa, K., van Gessel, N., Reski, R., Kozgunova, E.

Date: 2025-10-30 · Version: 2

DOI: 10.1101/2025.03.12.642918

plant cell division CRISPR/Cas9 screening co‑expression analysis Physcomitrium patens novel gene families

Engineering compact Physalis peruviana (goldenberry) to promote its potential as a global crop

Authors: Santo Domingo, M., Fitzgerald, B., Robitaille, G. M., Ramakrishnan, S., Swartwood, K., Karavolias, N., Schatz, M., Van Eck, J., Lippman, Z.

Date: 2025-10-24 · Version: 2

DOI: 10.1101/2025.08.15.670557

Model Organism: Physalis peruviana

Physalis peruviana Goldenberry CRISPR/Cas9 plant architecture compact ideotype

Phylogenomic challenges in polyploid-rich lineages: Insights from paralog processing and reticulation methods using the complex genus Packera (Asteraceae: Senecioneae)

Authors: Moore-Pollard, E. R., Ellestad, P., Mandel, J.

Date: 2025-10-13 · Version: 2

DOI: 10.1101/2025.09.14.676143

Model Organism: Multi-species

phylogenomic discordance polyploidy paralog processing Packera historical biogeography

A surface morphology-based inference method for the cell wall elasticity profile in tip-growing cells

Authors: Xu, R., Vidali, L., Wu, M.

Date: 2025-10-08 · Version: 3

DOI: 10.1101/2025.09.17.676748

Model Organism: Physcomitrium patens

cell wall elasticity tip‑growing cells surface triangulation mechanical modeling Physcomitrium patens

Cis-regulatory architecture downstream of FLOWERING LOCUS T underlies quantitative control of flowering

Authors: Zhou, H.-R., Doan, D. T. H., Hartwig, T., Turck, F.

Date: 2025-09-25 · Version: 1

DOI: 10.1101/2025.09.23.678055

Model Organism: Arabidopsis thaliana

FLOWERING LOCUS T enhancer architecture cis‑regulatory logic CRISPR/Cas9 chromatin accessibility

Choosing the Best Route: Comparative Optimization of Wheat Transformation Methods for Improving Yield by Targeting TaARE1-D with CRISPR/Cas9

Authors: Tek, M. I., Budak Tek, K., Sarikaya, P., Ahmed, A. R., Fidan, H.

Date: 2025-09-12 · Version: 1

DOI: 10.1101/2025.09.11.675438

Model Organism: Triticum aestivum

Triticum aestivum CRISPR/Cas9 Agrobacterium-mediated transformation TaARE1-D yield improvement

Setaphyte VERY-LONG-CHAIN FATTY ACYL DESATURASES are desaturases that impact glycerolipid and sphingolipid metabolism

Authors: Duminil, P., Herrfurth, C., Haslam, T. M., Feussner, I.

Date: 2025-08-13 · Version: 1

DOI: 10.1101/2025.08.12.669868

Model Organism: Physcomitrium patens

desaturases very‑long‑chain fatty acids sphingolipids glycerolipids Physcomitrium patens

tRNA-Based Polycistronic CRISPR/Cas9 System Boosts Efficiency of Multi-Gene Deletion in the Moss Physcomitrella.

Authors: Kozgunova, E.

Date: 2025-08-01 · Version: 1

DOI: 10.1101/2025.07.29.667574

Model Organism: Physcomitrium patens

CRISPR/Cas9 polycistronic tRNA‑gRNA array large gene deletion multiplex editing Physcomitrium patens

Integrative transcriptomic and phosphoproteomic analysis reveals key components of SnRK1 signaling network in rice

Authors: Faria-Bates, M. C., Maurya, C., Jamsheer K, M., Srivastava, V.

Date: 2025-07-23 · Version: 1

DOI: 10.1101/2025.07.22.666209

Model Organism: Oryza sativa

SnRK1 rice CRISPR/Cas9 phosphoproteomics stress response

Glycosylation-dependent sorting of an Arabinogalactan protein SLEEPING BEAUTY mediates apical tip growth and osmosensing in Physcomitrium patens

Authors: Yu, C.-Y., Maharjan, M., Liu, C.-H., Teh, O.-k.

Date: 2025-07-12 · Version: 1

DOI: 10.1101/2025.07.08.663806

Model Organism: Physcomitrium patens

Arabinogalactan protein cell wall rigidification glycosylation endocytic trafficking Physcomitrium patens

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