Keywords: paralog processing, FACE, transcriptomic analysis, SWI3, ascorbate, Arabidopsis thaliana

Latest 253 Papers

Liquid-phase determination of Arabidopsis respiration and photosynthesis using Clark-type O2 electrodes

Authors: Sena, F., Couture, C., Berais-Rubio, A., Millar, A. H., Signorelli, S.

Date: 2025-05-06 · Version: 1

DOI: 10.1101/2025.05.04.652138

Photosynthesis Respiration Clark-type oxygen electrode Arabidopsis thaliana Abiotic stress

Multi-year study on the effects of elevated CO2 in mature oaks unravels subtle metabolic adjustments but stable biotic stress resistance

Authors: Sanchez-Lucas, R., Raw, M., Datta, A., Hawkins, K., Brettle, D., Platt, E. A., Ullah, S., Hart, K., Mayoral, C., Stegner, M., Kranner, I., Hayward, S. A., Pastor, V., MacKenzie, A. R., Luna, E.

Date: 2025-05-06 · Version: 1

DOI: 10.1101/2025.05.03.652050

Model Organism: Quercus robur

elevated CO2 Quercus robur metabolomic profiling biotic stress FACE

SNRK3.15 is a crucial component of the sulfur deprivation response in Arabidopsis thaliana

Authors: Apodiakou, A., Heyneke, E., Alseekh, S., Pinsorn, P., Metzger, S., Kopriva, S., Schulze, W., Hoefgen, R., Whitcomb, S. J.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.04.29.651231

Model Organism: Arabidopsis thaliana

sulfate deprivation CIPK14/SNRK3.15 Arabidopsis thaliana kinase signaling proteomics

Acclimation of carbon metabolism to a changing environment across a leaf rosette of Arabidopsis thaliana

Authors: Brodsky, V., Kerscher, A., Urban, M., Naegele, T.

Date: 2025-05-03 · Version: 1

DOI: 10.1101/2025.04.29.651223

Model Organism: Arabidopsis thaliana

Arabidopsis thaliana leaf-specific acclimation photosynthesis carbon metabolism carbon balance modeling

Actin Depolymerization Factors (ADFs) Moonlighting: Nuclear Immune Regulation by Interacting with WRKY Transcription Factors and Shaping the Transcriptome

Authors: Li, P., Kelley, B., Li, Z., Procter, B., Corrion, A., Xie, X., Sheick, R., Lu, Y.-j., Nomoto, M., Wei, C.-i., Tada, Y., He, S.-Y., Xiao, S., Day, B.

Date: 2025-04-30 · Version: 1

DOI: 10.1101/2025.04.29.651294

Model Organism: Arabidopsis thaliana

actin depolymerization factors nuclear transcription regulation WRKY transcription factors plant immunity Arabidopsis thaliana

A role of villin-dependent F-actin organization in peroxisome motility in Arabidopsis cells

Authors: Huang, C., Koenig, A., Lee, Y.-R. J., Shi, Y., Hu, J., Liu, B.

Date: 2025-04-24 · Version: 1

DOI: 10.1101/2025.04.23.650090

Model Organism: Arabidopsis thaliana

Villin proteins F-actin organization Peroxisome motility Arabidopsis thaliana Mutant analysis

A citrullination-ubiquitination pathway controls pre-meiotic H1 eviction and is essential for gametogenesis in Arabidopsis

Authors: Li, Y., Fei, D., Schubert, J., Rutowicz, K., Kaczmarska, Z., Linares, A., Giraldo-Fonseca, A., Bischof, S., Grossniklaus, U., Baroux, C.

Date: 2025-04-22 · Version: 1

DOI: 10.1101/2025.04.18.649492

Model Organism: Arabidopsis thaliana

linker histone H1.1 citrullination ubiquitination spore mother cell Arabidopsis thaliana

The autophagy-related genes AtATG5 and AtATG7 influence reserve mobilisation and responses to ABA during seed germination in Arabidopsis thaliana

Authors: Contreras, E., Sanchez-Vicente, I., Pastor-Mora, E., Aylon-Rodriguez, M., Gonzalez-Ceballos, M., Delgado-Gutierrez, M. A., Lorenzo, O., Vicente-Carbajosa, J., Iglesias-Fernandez, R.

Date: 2025-04-21 · Version: 2

DOI: 10.1101/2024.05.15.593177

Model Organism: Arabidopsis thaliana

autophagy Arabidopsis thaliana ABA signaling ATG5/ATG7 ABI5

Large-scale single-cell profiling of stem cells uncovers redundant regulators of shoot development and yield trait variation

Authors: Xu, X., Passalacqua, M., Rice, B., Demesa-Arevalo, E., Kojima, M., Takebayashi, Y., Harris, B., Sakakibara, H., Gallavotti, A., Gillis, J., Jackson, D.

Date: 2025-04-17 · Version: 2

DOI: 10.1101/2024.03.04.583414

Model Organism: Multi-species

single-cell RNA sequencing shoot stem cells Arabidopsis thaliana Zea mays stem cell regulators

Dominance modifiers at the Arabidopsis self-incompatibility locus retain proto-miRNA features and act through non-canonical pathways

Authors: Batista, R. A., Durand, E., Mörchen, M., Azevedo-Favory, J., Simon, S., Dubin, M., Kumar, V., Lacoste, E., Cruaud, C., Blassiau, C., Barois, M., Holl, A.-C., Ponitzki, C., Faure, N., Marande, W., Vautrin, S., Fobis-Loisy, I., Aury, J.-M., Legrand, S., Krämer, U., Lagrange, T., Vekemans, X., Castric, V.

Date: 2025-04-12 · Version: 3

DOI: 10.1101/2024.05.01.591913

Model Organism: Arabidopsis thaliana

self-incompatibility small RNA precursors dominance hierarchy Arabidopsis thaliana non‑canonical gene silencing

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